Pairwise Alignments

Query, 246 a.a., Transcriptional regulator, IclR family from Variovorax sp. SCN45

Subject, 291 a.a., transcription regulatory protein (pca regulon) from Pseudomonas putida KT2440

 Score = 61.2 bits (147), Expect = 2e-14
 Identities = 62/253 (24%), Positives = 114/253 (45%), Gaps = 28/253 (11%)

Query: 17  PGGAAAVDRALSLLSAFQPGDEALSLAQFAERTQLYKSTVLRLLASLEHARLIRRQEDGR 76
           P    ++ R L+++ AFQ     L++AQ + RT++ ++ V R L +L   +L     DGR
Sbjct: 42  PDFMTSLARGLAVIQAFQERKRHLTIAQISHRTEIPRAAVRRCLHTL--IKLGYATTDGR 99

Query: 77  -YALGMEIARLHGLYAASLSLDRIVLPVLRALVAATGESAAYHVRQDQGDSWVRLCQFRI 135
            Y+L  ++  L   Y +S  L     P L  +     E+A  ++   +GD  + + +   
Sbjct: 100 TYSLLPKVLTLGHAYLSSTPLAISAQPYLDRISDQLHEAA--NMATLEGDDILYIAR-SA 156

Query: 136 DSSHVVRDHVRVGDLLPNDRGAGARVLIAFGPESELPRGAEERKL--------------- 180
               ++   + VG  LP    +  R+L+A   ++ L    E   L               
Sbjct: 157 TVERLISVDLSVGGRLPAYCTSMGRILLAAMDDTSLREYLERADLKARTSRTLNDPESLF 216

Query: 181 --YEDIRAQGWCALVGDRTAELAGISAPVFHADGSLAAAVTLTMPTHR-----YDERYIE 233
              + +RAQGWC +  +    L  I+ PV+ A G + AA+ ++    R      ++R++ 
Sbjct: 217 ACIQQVRAQGWCVVDQELEQGLRSIAVPVYDASGQVLAALNVSTHVGRVTRSELEQRFLP 276

Query: 234 PVRAAARELSGQV 246
            + AA+R+L  Q+
Sbjct: 277 ILLAASRDLCHQL 289