Pairwise Alignments

Query, 1082 a.a., Carbamoyl-phosphate synthase large chain (EC 6.3.5.5) from Variovorax sp. SCN45

Subject, 1074 a.a., carbamoyl-phosphate synthase, large subunit (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 1450 bits (3753), Expect = 0.0
 Identities = 737/1084 (67%), Positives = 866/1084 (79%), Gaps = 18/1084 (1%)

Query: 1    MPKRTDLKSILIIGAGPIIIGQACEFDYSGVQACKALREEGYKVILINSNPATIMTDPAT 60
            MPKRTD+KSILI+GAGPI+IGQACEFDYSG QACKALREEGY+VIL+NSNPATIMTDP  
Sbjct: 1    MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEM 60

Query: 61   ADVTYIEPITWQTVEKIIAKERPDAILPTMGGQTALNCALDLWRNGVLDKYTGAATNKPV 120
            AD TYIEPI W+ V  IIAKERPDAILPTMGGQTALNCAL+L   GVL ++        V
Sbjct: 61   ADATYIEPIQWEVVRNIIAKERPDAILPTMGGQTALNCALELEAKGVLAEFN-------V 113

Query: 121  ELIGATPEAIDKAEDRLKFKDAMTKIGLGSARSGIAHSMDEAWAVQKSVGFPTVIRPSFT 180
            E+IGAT +AIDKAEDR +F  AM  IGL   R+GIAHSM+EA+ V + VGFP +IRPSFT
Sbjct: 114  EMIGATADAIDKAEDRSRFDKAMKSIGLECPRAGIAHSMEEAYGVLEQVGFPCIIRPSFT 173

Query: 181  LGGTGGGIAYNPEEFETICKRGIEASPTNELLIEESLLGWKEYEMEVVRDKADNCIIVCS 240
            +GG+GGGIAYN EEFE IC +G++ SPT ELLI+ESL+GWKEYEMEVVRD+ DNCIIVCS
Sbjct: 174  MGGSGGGIAYNKEEFEEICSQGLDLSPTKELLIDESLIGWKEYEMEVVRDRNDNCIIVCS 233

Query: 241  IENLDPMGVHTGDSITVAPAQTLSDKEYQILRNASLAVLREIGVDTGGSNVQFSINPKDG 300
            IEN DPMGVHTGDSITVAPAQTL+DKEYQI+RNAS+AVLREIGV+TGGSNVQF INPKDG
Sbjct: 234  IENFDPMGVHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFGINPKDG 293

Query: 301  RMVVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELRNEITGGATPASFEPSID 360
            RMV+IEMNPRVSRSSALASKATGFPIAK+AAKLAVG+TLDEL N+ITGG TPASFEP+ID
Sbjct: 294  RMVIIEMNPRVSRSSALASKATGFPIAKIAAKLAVGFTLDELMNDITGGRTPASFEPAID 353

Query: 361  YVVTKIPRFAFEKFPQADSRLTTQMKSVGEVMAMGRTFQESFQKALRGLEVGVDGLN--- 417
            YVVTK+PRF FEKF  ++ RLTTQMKSVGEVMA+GRTFQES QKALRGLEV   GL+   
Sbjct: 354  YVVTKVPRFNFEKFAGSNDRLTTQMKSVGEVMAIGRTFQESLQKALRGLEVNRHGLDPIT 413

Query: 418  --EKTQDREVLEKELGEPGPERIWYVGDAFAMGLSVDEVFALTKIDPWFLVQIEEIVKIE 475
               K +    +  EL EPG +RIWY+ DA   GL++DE+F LT IDPWFLVQIEE++K+E
Sbjct: 414  DMSKPEAMARIRLELKEPGCDRIWYIADAMRAGLTLDEIFRLTNIDPWFLVQIEELIKLE 473

Query: 476  LELETKSLDDIDRDTLLALKKKGFSDRRLARQLKTTDTAIREKRRALGVRPVYKRVDTCA 535
             ++    L  ++ + L  LK+KGF+D RLA  L   ++ +R+ R    + PVYKRVDTCA
Sbjct: 474  GQVAEAGLAGLNEELLRKLKRKGFADARLAVVLGVNESEVRKLRDRFDIHPVYKRVDTCA 533

Query: 536  AEFATNTAYMYSTYEDECEADPTDKKKIMVLGGGPNRIGQGIEFDYCCVHAALAMREDGY 595
            AEFAT+TAYMYSTYE+ECEA+P+++ KIMVLGGGPNRIGQGIEFDYCCVHAALA+REDGY
Sbjct: 534  AEFATDTAYMYSTYEEECEANPSNRDKIMVLGGGPNRIGQGIEFDYCCVHAALALREDGY 593

Query: 596  ETIMVNCNPETVSTDYDTSDRLYFEPLTLEDVLEIVDKEKPLGVIVQYGGQTPLKLALDL 655
            ETIMVNCNPETVSTDYDTSDRLYFEP+TLEDVLEIV  EKP GVIVQYGGQTPLKLA  L
Sbjct: 594  ETIMVNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLARAL 653

Query: 656  EANGVPIIGTSPDMIDAAEDRERFQKLLHELKLLQPPNATARTEAEALEKAAALGYPLVV 715
            EA GVPIIGTSPD ID AEDRERFQ+ +  L++ QP N T  T   A+  A  +GYPLVV
Sbjct: 654  EAAGVPIIGTSPDAIDRAEDRERFQQAIQRLEMKQPENDTVTTVEGAVIAAERIGYPLVV 713

Query: 716  RPSYVLGGRAMEIVHEQRDLERYMREAVKVSNDSPVLLDRFLNDAVECDVDCLRDAEGQT 775
            RPSYVLGGRAMEIV++Q+DL RY  EAV VSN SPVLLD FL+DA+E D+D + D E   
Sbjct: 714  RPSYVLGGRAMEIVYDQQDLLRYFNEAVSVSNASPVLLDHFLDDAIEVDIDAVCDGE-TV 772

Query: 776  LIGGVMEHIEQAGVHSGDSACSLPPYSLSADTVAELKRQSAAMAAALNVVGLMNVQFAIQ 835
            +IG +MEHIEQAGVHSGDS CSLPPY+LS +    ++ Q   +A  L VVGLMNVQFA++
Sbjct: 773  VIGAIMEHIEQAGVHSGDSGCSLPPYTLSQEIQDRMRVQVGKLAMELGVVGLMNVQFAVK 832

Query: 836  QKDGKDVIYVLEVNPRASRTVPYVSKATGIQLAKVAARCMAGQSLKSQGVTKEVTPPYFS 895
              +    IY++EVNPRA+RTVP+VSKATG+ LAK+AAR MAGQSLK+Q  T+EV PP++S
Sbjct: 833  NNE----IYMIEVNPRAARTVPFVSKATGVPLAKIAARVMAGQSLKAQNFTQEVIPPFYS 888

Query: 896  VKEAVFPFVKFPGVDTILGPEMKSTGEVMGVGKTFGEAFVKSQLGAGTHLPKSGKVFISV 955
            VKE V PF KFPGVD +LGPEM+STGEVMGVG TF EA+ K+QLGA + +PKSG+  +SV
Sbjct: 889  VKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGDTFAEAYAKAQLGATSEVPKSGRALLSV 948

Query: 956  KNNDKARAVEVARGLVKLGFVLTATKGTAAAINAAGIECATVNKVTEGRPHIVDMIKNNE 1015
            +N+DK R  ++A  L++LG+ + AT GTA  +  AGI    VNKV EGRPHI+D IKN E
Sbjct: 949  RNSDKKRVADLAAKLIELGYQIDATHGTAVILGEAGINPRLVNKVHEGRPHILDRIKNGE 1008

Query: 1016 IALVINTVEERRNAITDSRQIRTSALLARVTTFTTIFGAEAAVEGMGFMDELGVISVQEM 1075
               ++NT E R+ AI DSRQ+R  AL  +V   TT+  A A        D   V SVQE+
Sbjct: 1009 YTYIVNTTEGRQ-AIEDSRQLRRGALRYKVNYTTTMNAAFATCMAHAADDRTNVTSVQEL 1067

Query: 1076 HAQL 1079
            H ++
Sbjct: 1068 HKRI 1071