Pairwise Alignments

Query, 408 a.a., PQQ-dependent oxidoreductase, gdhB family from Variovorax sp. SCN45

Subject, 367 a.a., dehydrogenase from Sinorhizobium meliloti 1021

 Score =  107 bits (267), Expect = 6e-28
 Identities = 99/349 (28%), Positives = 140/349 (40%), Gaps = 69/349 (19%)

Query: 45  DLPWRIAFLPDG-RMLITEKIGRLYLATQSG-QKLEVTGVPPVLYENQNGLLGVYLAPSF 102
           D PW I  + DG R+++TEK G + +      Q+  +    P+  E   GLLG+ LAP F
Sbjct: 61  DYPWDI--VRDGERLILTEKAGTVVIIEGGNVQRSTLQTSDPLRTEGGAGLLGIALAPDF 118

Query: 103 SSDGAIYLTYSEPGQIRGTSSLALARATLKIGAGTASLEDLKVIWHDPVKGKGGQVGAAV 162
           +  G  +  YS        + +  AR        TA L D        + G     G  +
Sbjct: 119 ADSGQAFFYYSYSSGSEPANRIVAARFDGNTWRETAVLVDA-------IPGHRLYNGGRI 171

Query: 163 AFSPDQKFLFLTAGDRQRFTPAQDPNQPAGKILRLTLDGKPAPGNPMEGKTGARSVPVID 222
           A  PD   L++T G  + +   QD    AGK+LRLTL G     NP +G           
Sbjct: 172 AIGPDDH-LYVTTGWTENYERPQDLQSLAGKVLRLTLAGGVPEDNPFQG----------- 219

Query: 223 PPRDTEAAKTAPVVRTYVFDGPNLTPSETWSSGHRTPYGLAFAPDGRLWELEHGPRGGDE 282
                                     S  +S GHR P GLA+  +G L+  EHG    DE
Sbjct: 220 --------------------------SLVYSFGHRNPQGLAWNAEGELFVSEHGQAALDE 253

Query: 283 LNLIEPGKNYGWPLVSYAVNYDGVPIASPDTRPDLVKPVIYWTPVLAPGNLMFYSGAMFP 342
           +NLI PG NYGWP++S             +T+  +  P ++     + G+    SG  F 
Sbjct: 254 INLIAPGANYGWPIIS-----------GDETQEGMQPPFVH-----SGGDTWAPSGIAFA 297

Query: 343 QWKGSAFATGLVSRALHRIEVHGATATPAEHWTVGFRVRAVEQAPDGAL 391
                   T L  R L+ ++    T  P    ++G RVR V    D  L
Sbjct: 298 --GNELLVTALQGRGLYVLDRQARTLQPVV--SLGERVRHVLPVGDDLL 342