Pairwise Alignments

Query, 281 a.a., Alkanesulfonate ABC transporter permease protein SsuC from Variovorax sp. SCN45

Subject, 253 a.a., ABC transporter permease from Methanococcus maripaludis S2

 Score =  136 bits (342), Expect = 5e-37
 Identities = 70/199 (35%), Positives = 113/199 (56%), Gaps = 1/199 (0%)

Query: 75  SGELWTHVKVSAGRALAGLAIGGGAGLALGLLTGSVKFAETLLDSTIQMVRNIPALALIP 134
           +G L  +  VS  R L G  I G   + LGLL G       L D+T++++R IP LA +P
Sbjct: 50  TGNLIENTIVSIKRVLIGFFIAGAFAIPLGLLMGYYSLINDLFDTTVELLRPIPPLAWVP 109

Query: 135 LVILWFGIDESAKLFLISVSVFFPIYLNTFHGIRNVDPQLIEMGRTYGLSRWQLYREVIL 194
           L + WFGI ES+  F+I +  FFPI +NT  G+++V   +IE  +T G S   + + V++
Sbjct: 110 LALAWFGIGESSMHFIIFIGAFFPILINTISGVKSVPVIMIEAAKTLGGSTKDILKSVVV 169

Query: 195 PGALSSILVGLRFSLGLMWVILIVAETI-SAQAGIGYLTMNAREFLQTDIVLVGILLYAL 253
           P +   IL GLR   G+ W+ ++ AE +  + AG+GYL M A    + +IV+  +++  +
Sbjct: 170 PASSPDILTGLRVGAGIAWMCVVAAEMLPGSDAGLGYLIMYAYSLSKMNIVVASMIIIGI 229

Query: 254 LGKLADLFARGLEQWWLRW 272
           +G + D   R +E+ +  W
Sbjct: 230 IGIILDKGLRYIEKKYFCW 248