Pairwise Alignments

Query, 447 a.a., two-component sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 461 a.a., hypothetical protein from Variovorax sp. SCN45

 Score =  117 bits (294), Expect = 6e-31
 Identities = 98/347 (28%), Positives = 158/347 (45%), Gaps = 11/347 (3%)

Query: 86  REGDLLFSSDTHLPALSLGRDANGFSDITLNG--ESWRYFQLSLPDQEKGKQYVLVAEKQ 143
           REG LL+ S    P ++ GR   G  D  ++   E+ RY+   L +    +  V VAE  
Sbjct: 98  REGKLLYES----PGIA-GRTLRGEPDRMVDAVVENQRYW---LYEGRSERWTVWVAEPN 149

Query: 144 SIRDEAINEIALSTALPQLILILCLIVVLVVLIERSFQPIQALKAAIALRSIHKLDRIYV 203
                 +  I  S  +P LI    ++  + +   +  +P++ L   I  RS   L  +  
Sbjct: 150 GGLSWVLMFIGSSIFMPFLIAFPFVLAPVWIAAAQGLKPLRVLGERIDTRSAEDLSPLGF 209

Query: 204 EKPTVELLPLVETLNQLLNELEQAWQREKRFTRMAAHELKTPLTVLRVNAENALRSTNQE 263
           E    EL+PLV+ +  LL +L    +RE+ F   AAHEL+TPL V+   A    RS++  
Sbjct: 210 EPRHAELVPLVKAIEGLLAQLRGKVERERSFVNDAAHELRTPLAVIGAQAHVLARSSDPR 269

Query: 264 QLKQDLERIFKGIERTDRLIHQLLMLAKVESTQTLRKQPVELANVIKQVIADLAPIAFKQ 323
           + ++    +   I R   LI QLL LA ++  +    Q +++A +++  +A  +  A  +
Sbjct: 270 EREEAARHLTHAIARGSHLIQQLLELATMDGGERPAVQRIDVAELMRHHLAQASKDADAR 329

Query: 324 DQQLSFHGESSRLWGDEL-LLGILFKNLLDNAIRYSGHSSQIAVELSDHDGEIEVRVSDT 382
             +L      S  +   + L   + +NLLDNA++Y     QI V L      + + V D 
Sbjct: 330 RLELVLESPDSLAFDLPVPLFESVLRNLLDNALKYVDAGGQIVVTLRQSADGLLLSVVDN 389

Query: 383 GAAIDDLTREKMFDNFYRANSQKGDGAGLGMSICRDIAALHGGQVLL 429
           G  I       +F+ F+R       G GLG++I R      GG V L
Sbjct: 390 GPGIPREEHALVFERFHRGAGTSTQGTGLGLAIARQACQRMGGTVEL 436