Pairwise Alignments

Query, 270 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 274 a.a., ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  107 bits (266), Expect = 4e-28
 Identities = 78/250 (31%), Positives = 117/250 (46%), Gaps = 3/250 (1%)

Query: 20  VSLLILLVMLVLI--EHLLYGGDPAKQDLNRALAAPSWGEPLGTDHYGRSNFARLSSAIA 77
           VS L+LLV+ V+     L    DP    +   L APS    LGTD  GR  ++R+     
Sbjct: 13  VSALVLLVIAVMAIGAPLFASADPNDTAVLERLKAPSAEHLLGTDELGRDMYSRIVHGAR 72

Query: 78  TSLTMAVACVSSSALLGLVTGVVAAWKRGWWDRGFSWLLNMLLAMPGLILVLLFGAMVPG 137
            SL +A      + + G V G++A + R   D     +++ +++ P ++L +   A++  
Sbjct: 73  YSLAIAALTALGAVVAGTVLGLMAGFFRRL-DAPLMRVVDAMMSFPDILLAIALVAILGP 131

Query: 138 SFFILYLAIALMLWVEFFRVVRSKTLSLLEQPQIEASRLYGFNAWYLFRRHLWPELREDL 197
           S     LA+ L+      RVVR+ TL + E   +EA R  G     +  RH+ P L   +
Sbjct: 132 SLVNTVLALVLVYTPRVARVVRASTLVVRELLFVEAVRALGVRTSRILWRHILPNLMSPI 191

Query: 198 FTLACFGAGNAILALASIGFLYVGLKPPQAELGMMMVELFRYYHQALWVLAQPILVVFIL 257
                F    AILA A + FL VG+ P     G M+    +Y HQA WV+  P L +   
Sbjct: 192 LVQVSFIFAYAILAEAGLSFLGVGVPPEIPTWGTMVAGSQQYAHQAFWVVLFPGLAIIFT 251

Query: 258 VLSFQMLAKG 267
            LS Q+L  G
Sbjct: 252 ALSLQLLGDG 261