Pairwise Alignments

Query, 521 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 528 a.a., extracellular solute-binding protein, family 5 from Pseudomonas syringae pv. syringae B728a

 Score =  103 bits (258), Expect = 1e-26
 Identities = 118/470 (25%), Positives = 198/470 (42%), Gaps = 63/470 (13%)

Query: 81  PLLAKSWTVSDDGLVWRFQIRPEVQFHDGS------QLTAQAAATALN---------HAL 125
           P LA SWTVS DGL + F++ P V+FH         +L+A     +           H +
Sbjct: 69  PSLADSWTVSKDGLTYDFKLHPGVKFHTTDYFKPTRELSADDVLFSFQRMLDPQNPWHKI 128

Query: 126 GKPGV----IKQVP--IKAITAQNDQVVIELNTVYRPLAAVLAHYSLAIASPSSYDASGN 179
            + G       Q+P  IK+I A +   V    T+    +  LA  S+  AS  S + +  
Sbjct: 129 AQSGFPHAQSMQLPALIKSIEAPDAHTV--RFTLNHADSTFLATLSMGFASIYSAEYTAQ 186

Query: 180 VIRL----------LGTGPYQIAQLQAPHKASVIRFNA---YWGKPASIETINYLAGHRS 226
           +++           +GTGP+   + Q   K +V+R+ A   Y+   + I+T+ Y     +
Sbjct: 187 LLKAGTPEKLNSQPIGTGPFVFKRFQ---KDAVVRYEAFDDYFAGKSDIDTLVYAITPDA 243

Query: 227 ESRALLAQTGQADLVYTLDPISIPSLQQSHNLDLYIESMPRTVLIKLNNEHPLLNHADVR 286
             R    +  +  +  +  P+ I +  +  +L +       T  + +N++HP  +  +VR
Sbjct: 244 NVRLQKIRQDECQIALSPKPLDIQAASKDDSLKVEKTEAFMTAFVAINSQHPPFDKPEVR 303

Query: 287 QAISLAINREGIAQSVLKLPGSEAHQLFSPALGAWHLA-DKTQPQRHLATAQTLLANQGW 345
           QAI+LA +R+   ++V +    +A+  + P    W  A D    Q  +A A+ LLA  G 
Sbjct: 304 QAINLAFDRDNYLKAVFEGTAEKANGPYPP--NTWSYAKDLPGYQHDVAKAKALLAKAG- 360

Query: 346 TLNDQGLLEREGQAFRVQLLTYAD----RPELPLIATALQAQLKEIGIQVDIAIDNSSAI 401
                    +EG  F+  + T        P   L A  LQA LK+IGI  +I I     +
Sbjct: 361 --------VKEG--FKTTIWTRPSGSLLNPNPSLGAQLLQADLKQIGINAEIKIIEWGEL 410

Query: 402 PAKHHDGTLEMALIARNFGTIADPLPLLLSDF---ATHQGSDWGPTNWSSPQFSQLLAEL 458
             +   G  ++ L     G   DP   L   F   A   G+++    +      +L+A+ 
Sbjct: 411 IRRAKAGEHDL-LFMGWAGDNGDPDNFLTPQFSCAAVQSGTNF--ARYCDKTLDKLIADG 467

Query: 459 STESDNARYQQLAAQASQLLADEMPLIPVTYYRQIVSVNKRVAGFSFDPF 508
            + SD     +L  QA Q +  +   IP+ +      V K V G+   PF
Sbjct: 468 KSVSDQGERSKLYHQAQQQIQQQALWIPLAHPTAAALVRKDVTGYQVSPF 517