Pairwise Alignments

Query, 720 a.a., chemotaxis protein CheA from Vibrio cholerae E7946 ATCC 55056

Subject, 656 a.a., chemotaxis protein CheA from Erwinia amylovora T8

 Score =  439 bits (1129), Expect = e-127
 Identities = 275/699 (39%), Positives = 395/699 (56%), Gaps = 63/699 (9%)

Query: 3   LDMEQLRKIFHVECRENLETLEGELLQLDPSQVDLEVLNTIFRAAHSIKGGAGTFNLHEI 62
           +D+    ++F  E  E L  +E  LL LD ++ D+E LN IFRAAHS+KGGA TF    +
Sbjct: 1   MDLNDFSQVFFSEAEELLSDMEQHLLLLDVARPDIEQLNAIFRAAHSLKGGAATFGFSVL 60

Query: 63  SEFTHAVETYLDLIRNQKKQLTAQGVDTLLKSCDVIRNMLDSREQETAIDEALKQQVGAE 122
            E TH +E  LD  R  + QL+   V+  L+  D+++  L++ +     DE   + + A 
Sbjct: 61  QETTHLLENLLDKARCGEIQLSRDMVNLFLEGKDIMQAQLEAYQSLQEPDEECFRYICAA 120

Query: 123 LQALLADQGADRVMSQAQPVS-SNTHTSNMHADAIAIPDATAQGWRIRFVPHETLFYSGN 181
           LQ +   +  +  +   QP + S TH +            T  G +++            
Sbjct: 121 LQKIALSEKGELSLPVEQPATPSVTHAATSEVRL----TVTLSGIKMQ------------ 164

Query: 182 DPLRILRELRELGSEYQIELDHQALPELAEIDPELCYLSWTIRLTGDVSENDVRELFDWV 241
           +   +L EL  LG+     + H+ +    E++ E   L+           +++  +  +V
Sbjct: 165 EQSLLLDELANLGT----VIGHRPVASGIEVELETSVLA-----------DEIGAVLCFV 209

Query: 242 EDECDLHIAPILSDEASAHVEDEQAAPAATLQSNPQTQVEPVAIVDLPAVEPPVATVAPV 301
            DE  + I P      SA V    AA A                   PA  P V   A  
Sbjct: 210 LDESQIDIRP------SAGVSPPVAADAVA-----------------PAQIPAVTAAAAA 246

Query: 302 IANPKESATNKPAKTDSSVSSIRVDIEKVDNLINLVGELVITQSMLTELGNDFSMDKLDK 361
           I + K     +P+ T+S   SIRV +EKVD +IN VGEL+ITQS+ ++L       K   
Sbjct: 247 ITSTKPDMAKRPSATES--GSIRVAVEKVDMIINQVGELIITQSIFSQLTEQLDPAKYGM 304

Query: 362 LKAGLAQLLQNSKDLQENVLNIRMLPMSFAFSRFPRLVRDLCGRLGKKVDLQIQGEQTEL 421
           L + +AQL +N+++LQ++V++IRM+PM + FSRFPRLV DL  RL K+V+L + G   EL
Sbjct: 305 LLSSVAQLERNARELQQSVMSIRMMPMDYVFSRFPRLVHDLGARLNKEVELTLLGGAAEL 364

Query: 422 DKTVLERIVDPLVHLVRNGIDHGVEMPDVRLAKGKPETGVITLKAFHQGGSIIVEISDDG 481
           DK+++ERI+DPL HLVRN +DHG+E  D RL KGK  TG +TL A H GG+I++E+ DDG
Sbjct: 365 DKSLIERIIDPLTHLVRNSLDHGIEEKDERLRKGKSATGNLTLSAEHHGGNIVIEVRDDG 424

Query: 482 AGIDCDKLWRKAVEKGVLEPQTQRSD-LTDKQIINLIFAPGFSTAEQVSDISGRGVGMDV 540
           AG++ +KL  KA  +G     TQ +D  +D ++  LIFA GFSTA  V+D+SGRGVGMDV
Sbjct: 425 AGLNREKLLAKARSRG-----TQIADSASDDEVWMLIFAAGFSTATNVTDVSGRGVGMDV 479

Query: 541 VRRNIEELGGQIEVDSELGRGSRFTISLPLTLAILDGQLVKVADQVYVIPLLTIVESIQI 600
           VRRNI  +GG +EV S   +G+   I LPLTLAILDG  VKV D++YV+PL  ++ES++ 
Sbjct: 480 VRRNILAMGGHVEVCSVRDQGTTIRILLPLTLAILDGMSVKVGDEIYVLPLNVVMESLKP 539

Query: 601 NTASVKHAAGGIELYRLREENIPILRLQDELAMGRSGSLEKRLICFVESAGHRVGLLVDD 660
           +   +    G   L ++R E +P+  L+    +    + E  +I  V+S G R  L VD 
Sbjct: 540 SADMLYQFVGQSRLVQVRGEYLPLTELRQAFDVSGEAASEDGIIVIVQSGGCRYALWVDQ 599

Query: 661 LLDQQQVVIKSLESNYAKVAGISGATILGDGSVSLILDI 699
           L+ Q QVV+K+LE NY KV GIS ATILGDGSV+LILD+
Sbjct: 600 LVGQHQVVVKNLEHNYRKVPGISAATILGDGSVALILDV 638