Pairwise Alignments

Query, 720 a.a., chemotaxis protein CheA from Vibrio cholerae E7946 ATCC 55056

Subject, 762 a.a., chemotaxis histidine kinase protein cheAI from Caulobacter crescentus NA1000 Δfur

 Score =  468 bits (1205), Expect = e-136
 Identities = 292/759 (38%), Positives = 416/759 (54%), Gaps = 79/759 (10%)

Query: 4   DMEQLRKIFHVECRENLETLEGELLQLDPSQVDLEVLNTIFRAAHSIKGGAGTFNLHEIS 63
           ++E ++  F  EC E L  LEG LL ++    DLE +N +FRA HSIKGGAG F L  + 
Sbjct: 3   ELEAIKVTFFQECEELLADLEGGLLAMEEGAGDLETVNAVFRAVHSIKGGAGAFGLEPLV 62

Query: 64  EFTHAVETYLDLIRNQKKQLTAQGVDTLLKSCDVIRNMLDSREQETAIDEALKQQVGAEL 123
            F H  ET LD +R      T +    LL++ D++ + + +      +D A    + AEL
Sbjct: 63  RFAHVFETLLDAVRAGSVPNTVELAAVLLRASDILADHVSAARGLGDVDMAASAAMAAEL 122

Query: 124 QALL---------ADQGADRVMSQAQP---------------------VSSNTHTSNMHA 153
           +            A   A  V  +  P                     V          A
Sbjct: 123 EQWTDPNATPTAPAPVAAPTVAEEPAPAPALIGADDDAMDGDDLGFVFVPQTITVEAQAA 182

Query: 154 DAIAIPDATAQGWRIRFVPHETLFYSGNDPLRILRELRELGSEYQIELDHQALPELAEID 213
           DA  IP      W +   P   L+   N+   +LREL  LG   +  LD  ALP L  +D
Sbjct: 183 DAELIPSNV---WTVSIRPKSDLYRKANETALLLRELSRLGP-IKATLDDSALPLLQNLD 238

Query: 214 PELCYLSWTIRLTGDVSENDVRELFDWVEDECDLHIAPILSDEASAHVEDEQAAPAATLQ 273
           PE  +++W++RL  D  E  +RE+F++V+ +CDL I      E S     E +  A T  
Sbjct: 239 PEAAFITWSVRLETDQDETAIREVFEFVDGDCDLEIT---RGEGSV----EASIAALTAP 291

Query: 274 SNPQTQVEPVAIVDLPAVEP-------------PVATVAPVI-------ANPKESATNKP 313
           + P   VEP+A    PA EP             PVA VAP +       A P  +A   P
Sbjct: 292 AEPVAAVEPIA----PAPEPVEVAPPIAPPAAAPVAEVAPAVEAAKPAAAAPAAAAAAAP 347

Query: 314 AKTDSSV-----SSIRVDIEKVDNLINLVGELVITQSMLTELGNDFSMDKLDKLKAGLAQ 368
             T   V     S IRVD E++D LI+LVGELVI Q+ML +   ++ +     L  GL +
Sbjct: 348 KATPVEVPGPGQSVIRVDPERIDRLIDLVGELVINQAMLAQRVGEYGIAPSSNLAMGLDE 407

Query: 369 LLQNSKDLQENVLNIRMLPMSFAFSRFPRLVRDLCGRLGKKVDLQIQGEQTELDKTVLER 428
           L Q ++++Q++V+ IR  P+   F R PRLVR++    GK+  L + GE TE+DKTV+ER
Sbjct: 408 LEQLTREIQDSVMAIRAQPVKSVFQRMPRLVREVANMTGKQARLVMDGENTEVDKTVIER 467

Query: 429 IVDPLVHLVRNGIDHGVEMPDVRLAKGKPETGVITLKAFHQGGSIIVEISDDGAGIDCDK 488
           + DP+ H++RN IDHG+E P+ R A GK   GV+ L A H+ G I++E+SDDG GI+ ++
Sbjct: 468 LSDPITHMLRNAIDHGLESPEERKAAGKNPEGVVRLAALHRSGRIVIEVSDDGKGINRER 527

Query: 489 LWRKAVEKGVLEPQTQRSDLTDKQIINLIFAPGFSTAEQVSDISGRGVGMDVVRRNIEEL 548
           ++  AV+KG++ P  Q   LTD++I NLIF PGFSTAE++SD+SGRGVGMDVV+R+++ L
Sbjct: 528 VFGIAVKKGLIAPDLQ---LTDEEIDNLIFLPGFSTAEKISDVSGRGVGMDVVKRSVQAL 584

Query: 549 GGQIEVDSELGRGSRFTISLPLTLAILDGQLVKVADQVYVIPLLTIVESIQINTASVKHA 608
           GG+I + S  G+GS FT+SLPLTLA+LDG +V VA +  V+PL  IVES++     V+  
Sbjct: 585 GGRISISSRPGQGSTFTLSLPLTLAVLDGMVVDVAGETLVVPLAAIVESLRPKPEEVRPL 644

Query: 609 AGGIELYRLREENIPILRLQDELAMG---RSGSLEKRLICFVESA-GHRVGLLVDDLLDQ 664
                +  +R+  +P++ +   L +G    S      ++  VE   G R  L+ D +  Q
Sbjct: 645 GPVGSVLAVRDSFVPLIDV--GLTLGYREESPHPTDGVVLLVEGEDGSRAALVADAIHGQ 702

Query: 665 QQVVIKSLESNYAKVAGISGATILGDGSVSLILDIPGLI 703
           +QVVIKSLE NY +V G++ ATILGDG V+LILD+   I
Sbjct: 703 RQVVIKSLEQNYQQVEGVAAATILGDGRVALILDVDATI 741