Pairwise Alignments

Query, 301 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 313 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella sp. ANA-3

 Score =  166 bits (421), Expect = 5e-46
 Identities = 99/290 (34%), Positives = 161/290 (55%), Gaps = 7/290 (2%)

Query: 8   LADIRAFVLIAKLGNFTKAAEELGVSRSHVSRQLSQLENSMGVTLVIRTTRSLSLTDAGE 67
           L  I  F  +A+ G+F+ AA  LG+S+S VS Q++ LE+ +GV L+ RTTRSLSLT+AG 
Sbjct: 5   LEPIAIFTHVARAGSFSAAARRLGISKSKVSTQVADLEHRLGVQLIQRTTRSLSLTEAGH 64

Query: 68  LFYRQCEQALSSIEQAVLAAVDDVQEA-RGELRINSVGGHIGEELIADICSAFMQENPDV 126
           L Y Q E+ L   EQA+ A+V ++ +A RG L++  +    G   I     +FM ++P++
Sbjct: 65  LLYLQGEELLRDAEQAI-ASVHNLNDATRGVLKV-GISQSFGAMHIIPALPSFMAKHPEL 122

Query: 127 RIHLDFSSHRVDLIEEGFDVAFRMGKLEDASFVARKLTEIRMSTLASPAYFTLCGQPQHP 186
            + +    H+VD++ EG D+   M +      VAR L + +   +ASP Y    G+P  P
Sbjct: 123 ELQVSLLDHKVDVVSEGLDLLLTMSEQLPLGMVARPLMKCQFLLVASPDYIAKHGEPSRP 182

Query: 187 KQLADHRCLT--GSVKRWS-YQHKETKQTLDVPVDGDLQCKNGRVLVRAALAHNGIIRVP 243
           +QL DH CL   G     S +Q K+     ++ V G+ +  N   L  AA++  G++ + 
Sbjct: 183 EQLVDHNCLVYQGEWHEHSMWQFKKGDDYCEIGVSGNFRVDNAPALKSAAISGLGVVYLA 242

Query: 244 TFYCHQELARGELVEVFQDWHIP-SVEFSLIYHKDKYQPVRLKRFIEFSK 292
           ++    E+A+G LV + +DW +   +    +Y + K+   ++  FIEF K
Sbjct: 243 SYLMEDEIAKGTLVPLLRDWQLTHHLPLQAVYPRRKHLAPKVSAFIEFIK 292