Pairwise Alignments

Query, 261 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 309 a.a., DNA-binding response regulator (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 74.7 bits (182), Expect = 2e-18
 Identities = 74/298 (24%), Positives = 128/298 (42%), Gaps = 57/298 (19%)

Query: 7   TAVLADDEPLLRHHLNKLLAELWPALEIVASAENGQIALQAIEQHQPDVVFLDIRMPK-M 65
           + +L   +P+LRH L  +L  +   L ++  A   + AL  +       VFL I + +  
Sbjct: 5   STLLVHPDPMLRHRLRAMLEPV-DFLRVLGEAAGAEEALALLNALPYGAVFLGISLAEGP 63

Query: 66  DGIEVARRLLQQPKVPLVVFITAYDEYAVSAFETHAIDYLLKPLSSSRLASCCEKLQQ-Q 124
           DG+EVARRL+     P ++FI   +  A  AFE  A DYL+ P ++ R      +L+Q +
Sbjct: 64  DGMEVARRLMGNRDHPALIFIADDESRAFEAFELDATDYLIFPCAADRFDRTLMRLRQFR 123

Query: 125 LRRNVAPS---------------------NDLAQLMSQ----FEQLTRTVKPQYQVWLKA 159
               +AP+                     +DL    ++    FE L   +    Q  L +
Sbjct: 124 THFRLAPAPGSRWREQPQAAPEELPPPAMDDLPPPGTEEGPPFETLQLPLAEDEQDTLIS 183

Query: 160 SKGEEIH----------------------LIAVNELLYVKAEDKYLSLYKVHGATTHEYL 197
           + GE +                       LI   E+ +V+A + Y  ++        +YL
Sbjct: 184 ALGEAVDYSQRVRPVELDKLAVSVDGKTLLIPYGEIAFVEAYEDYSYVH----TADDKYL 239

Query: 198 LRSSLKELLAQLDPNQFWQIHRSIVVNVGKIDKVTRDFGGKMWVHI---DRLQLPVSR 252
               LK L  +L P++F+++HR  +VN+  + ++    GG   +      R++LP+SR
Sbjct: 240 TSYRLKNLEGRLRPHRFFRVHRKYLVNLDMVTELAAVSGGNCLLRTAGRTRIELPISR 297