Pairwise Alignments

Query, 318 a.a., resolvase from Vibrio cholerae E7946 ATCC 55056

Subject, 208 a.a., site-specific recombinase, resolvase family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 58.5 bits (140), Expect = 1e-13
 Identities = 53/188 (28%), Positives = 87/188 (46%), Gaps = 11/188 (5%)

Query: 121 YGYGRVSTDEQTTSQQLTAIRE-AGHKVSDNRFIVDEGVSGGVCAMERPAFRNLVENKLE 179
           Y Y RVSTD Q    Q   I E A      N   V++ VSG      R    +L+E+   
Sbjct: 4   YAYLRVSTDAQDVDNQKHGILEFANQHGLSNLSFVEDTVSGKHKWRAR-KLGDLLESLAP 62

Query: 180 KGDTLVIAKLDRLGRDNIDVQQVVQMLTDKGIKLFILDLPVADLSSPEGKLMLQMFATFA 239
           K D +V A++ R+ R  + V ++++  T++ I ++I    +    S + ++   +    A
Sbjct: 63  K-DVIVFAEVSRMARSTLQVLEILEFCTERQIHVYIAKQKMILDDSMQSRITATVLGLAA 121

Query: 240 EFEKNRISERIRDKLKQLKQEGKALGRPT----KNVYDD----VQELKAQGISQRTIADK 291
           E E+  IS R ++ L   K  G  LGRP     K   D     ++    +G+S R+IA  
Sbjct: 122 EIEREFISLRTKEALAARKAAGMKLGRPAGQAEKTKLDKHRKAIESYLDKGLSIRSIAKL 181

Query: 292 LNVSLSTV 299
           ++   +TV
Sbjct: 182 IDEPSTTV 189