Pairwise Alignments

Query, 422 a.a., DEAD/DEAH box helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 409 a.a., DEAD/DEAH box helicase domain-containing protein (RefSeq) from Shewanella sp. ANA-3

 Score =  415 bits (1067), Expect = e-120
 Identities = 214/406 (52%), Positives = 289/406 (71%), Gaps = 2/406 (0%)

Query: 6   ITFSQLGLDSRLLNTLSELGIANPTPIQQQAIPHVLQGKDVLAGAQTGTGKTAAFGLPLI 65
           ++FS L L S+L+NTL+ELG   PTPIQ +AIP +L  +DV+AGAQTGTGKTAAF LP++
Sbjct: 1   MSFSALSLHSQLVNTLAELGYQQPTPIQIEAIPAILAKQDVMAGAQTGTGKTAAFALPIL 60

Query: 66  QRFIEQPWQREANSKEIRALVLVPTRELAQQVLDSLQAYAKGTELKIVAVYGGTSMKVQL 125
           Q+ +     ++A  K++RALVLVPTRELA QV  S   YAKGT++++   YGG S++ Q 
Sbjct: 61  QQLLIDNESQDA-PKDVRALVLVPTRELAVQVQQSFVKYAKGTDIRVGIAYGGVSIEAQQ 119

Query: 126 NHLRGGVDILIATPGRLLDHAHVKSLFLGKVEVLVLDEADRMLDMGFMPDLQRVLRRLSP 185
              + G+D+LIATPGRLLDH    +L L ++ VLV DEADRMLDMGFM +++ VL+++  
Sbjct: 120 AEFKAGIDVLIATPGRLLDHLRQGALNLKRLSVLVFDEADRMLDMGFMDEIKAVLKQVPA 179

Query: 186 LRQTLFFSATFDSKIKAVAYRIMRDPIEVQVTPSNSTAETVQQMVYPVDKKRKRELLSYL 245
            RQTL FSAT D  I   +  ++RDP  ++V   N+TA  V+Q VY +D  RK E +S+L
Sbjct: 180 QRQTLLFSATLDDSIFGFSKNLLRDPKLIEVAKRNTTAAQVEQRVYAIDSDRKTEFVSHL 239

Query: 246 IGSKNWQQVLVFTKTRQGSDALAEELKLDGIKAVSINGDKSQGARQKALDDFKAGKVRAL 305
           + SKNWQQVL+F++T+QG D L  +L   G+   + +GD SQGAR+K L DFK G V+ L
Sbjct: 240 VRSKNWQQVLIFSRTKQGVDKLTTQLNQLGVATQAFHGDLSQGAREKVLKDFKQGLVQVL 299

Query: 306 IATDVAARGLDIAQLEQVVNYDMPFKAEDYVHRIGRTGRAGLAGLAVSLLSHDEQPQLEA 365
           +ATDVAARGLDIA L+ V+N+++PF AEDY+HRIGRTGRAG AGLA++L S ++   LE 
Sbjct: 300 VATDVAARGLDIADLQYVINFELPFIAEDYIHRIGRTGRAGSAGLAITLFSQEDALLLEE 359

Query: 366 IERLLNTRLPQEWLKGFEPSPVVHEENSPRRSAGRSSEKRKLKAQL 411
           +E LL+ RLPQ+W  GFEP      E  PRR++  + ++R  K  L
Sbjct: 360 VEALLDKRLPQQWYPGFEPD-FNKMEPEPRRNSKAAQKQRAKKRAL 404