Pairwise Alignments

Query, 243 a.a., arginine ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 251 a.a., Lysine-arginine-ornithine-binding periplasmic protein precursor (TC 3.A.1.3.1) from Pseudomonas fluorescens FW300-N2E2

 Score =  156 bits (395), Expect = 3e-43
 Identities = 87/246 (35%), Positives = 145/246 (58%), Gaps = 10/246 (4%)

Query: 2   KKILLASLIGLV-SASAAAQQEIKFVMEATYAPFEYMDENNQIQGFDVDLANALCKQLEA 60
           +K LLA+ + LV S SA A +++K  +EA Y PF   D + Q+ GFD D+ +ALC +++ 
Sbjct: 5   RKFLLAAAVSLVFSTSAMAVEKLKMGIEAAYPPFNNKDASGQVVGFDKDIGDALCAKMKV 64

Query: 61  KCSFHNQAFDSLIPALKFKRYDAAISAMDITEARLEQVNFSNPYYDNSAAFVSLAGK--V 118
           +C      +D +IPAL  K++D  IS++ + + R + V+F++PYY N   F++       
Sbjct: 65  ECEVVTSNWDGIIPALMAKKFDFLISSLSVNDERKQAVDFTDPYYSNKLQFIAPKNVDFK 124

Query: 119 ADQAALKGKRVGVQNGSTHQSFLLEQL-SDVVAVPYSSYQDAFIDMKNGRIDSVFGDTAV 177
            D+ +LKGK +G Q  +   ++L ++L SD+ A  Y + ++A++D+ +GR+D++  D  V
Sbjct: 125 VDKESLKGKVIGAQRSTLAGTWLEDELGSDITAKLYDTQENAYLDLTSGRVDAILADKYV 184

Query: 178 VAEWFKGDNNLAY--VGERVTNAQYFGNGFGIAVNKDNQALLDQLNAALEAVKENGEYAA 235
             +W K +   AY   G+ V      G+   IAV K N  L ++LNAAL+ +  +G Y  
Sbjct: 185 NYDWLKTEAGRAYEFKGDPVVE----GDKIAIAVRKGNDELRNKLNAALKEILADGTYKK 240

Query: 236 IFNKYF 241
           I +KYF
Sbjct: 241 INDKYF 246