Pairwise Alignments

Query, 243 a.a., arginine ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 251 a.a., ABC-type amino acid transport/signal transduction systems, periplasmic component/domain from Pseudomonas stutzeri RCH2

 Score =  143 bits (360), Expect = 4e-39
 Identities = 82/246 (33%), Positives = 136/246 (55%), Gaps = 10/246 (4%)

Query: 2   KKILLASLIGLVSASAA-AQQEIKFVMEATYAPFEYMDENNQIQGFDVDLANALCKQLEA 60
           KKILL +   L+  + A A ++++   E  Y PF  +D + ++ GFD+D+++ALC +++ 
Sbjct: 5   KKILLTAAASLIIGTQAFAAEKLRIGTEGAYPPFNLIDASGKVVGFDLDISHALCAKMKV 64

Query: 61  KCSFHNQAFDSLIPALKFKRYDAAISAMDITEARLEQVNFSNPYYDNSAAFVSLAGK--V 118
           +C      +D +IPAL   ++D   ++M +TE R   V+F++ YY N   FV+       
Sbjct: 65  ECEVVTSDWDGIIPALNAGKFDFLAASMSVTEERKNAVDFTDHYYTNKLQFVAPKNVEFQ 124

Query: 119 ADQAALKGKRVGVQNGSTHQSFLLEQLSDVVAVP-YSSYQDAFIDMKNGRIDSVFGDTAV 177
            D+  LKGK +G Q  +   ++L + L  VV +  Y + ++A++D+ +GR+D +  DT V
Sbjct: 125 TDEGYLKGKVIGAQRATIAGTWLEDNLDRVVDIKLYDTQENAYLDLASGRVDGILADTFV 184

Query: 178 VAEWFKGD--NNLAYVGERVTNAQYFGNGFGIAVNKDNQALLDQLNAALEAVKENGEYAA 235
             EW K D   N  + GE V    +  +   IAV K N  L ++LN AL  +  +G Y  
Sbjct: 185 QWEWLKSDAGKNFEFKGEPV----FDDDKIAIAVRKGNDELRERLNKALAEIIADGTYKQ 240

Query: 236 IFNKYF 241
           I +KYF
Sbjct: 241 INDKYF 246