Pairwise Alignments

Query, 229 a.a., ABC transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 221 a.a., Cystine ABC transporter, permease protein from Pseudomonas fluorescens FW300-N2E2

 Score =  135 bits (339), Expect = 8e-37
 Identities = 74/204 (36%), Positives = 120/204 (58%), Gaps = 7/204 (3%)

Query: 10  LVQASWMTLQIALASLLVGLLLALVFAGGEMAKLKLIKWPTTLLVTVIRGLPELLVVLFI 69
           L++ ++ T+ ++L  +  GLLL    A   +++ KL+ W   + V+  RG P L+ +  I
Sbjct: 15  LLKGAYYTVFLSLGGMFFGLLLGFGLALMRLSRFKLVNWIARIYVSFFRGTPLLVQLFVI 74

Query: 70  YFGSTQVLFFITGEFIEISPFISGVIALSLIFASYASQTLRGALKAVGRGQREAASALGI 129
           Y+G  Q+        IE+ P  + +I  SL  A+YA + LR A+ ++ RGQ EAA+++G+
Sbjct: 75  YYGLPQL-------GIELDPLPAALIGFSLNMAAYACEILRAAISSIERGQWEAAASIGM 127

Query: 130 PPSHAFIRIVLPQAVRHALPGLMNQWLVLLKDTALVSLIGVTDLLKQAQLTSAATHEAFT 189
             +    R +LPQA R ALP L N ++ L+KDTAL + I V +L +QAQL +A T E FT
Sbjct: 128 TRAQTLRRAILPQAARTALPPLGNSFISLVKDTALAATIQVPELFRQAQLITARTFEIFT 187

Query: 190 WYATAAVVYLVITLITQRVVKVID 213
            Y  AA++Y V+  +   +  V++
Sbjct: 188 MYLAAALIYWVLATVLSHLQNVLE 211