Pairwise Alignments

Query, 587 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 541 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  176 bits (446), Expect = 2e-48
 Identities = 118/355 (33%), Positives = 190/355 (53%), Gaps = 9/355 (2%)

Query: 232 TTKLSVTIAVVLIILLVIFQISRSINLQVSQLLLVIQRIAQSNDISLRAELKGNDE---- 287
           T  ++V++A  L+ +L+ + ++RSI   + + + V + IA  N +S   E  G DE    
Sbjct: 190 TGVIAVSVAAALLTVLLAWLLTRSIVTPLRKAVEVAETIAGGN-LSKAIEDDGKDEPARL 248

Query: 288 ITAVARYFNSLLDKFEHLISSSQTKSHQLYSSTSSMHDELEQVIEQFNVQSEHMGLMATS 347
           + A+A    +L    +H+  S+     QL S+   +    E+  +    Q+  +   AT+
Sbjct: 249 LGALATMQANLRQTIQHIAGSAT----QLASAAEELSAVTEEASKGLQQQNNEIDQAATA 304

Query: 348 VQQMVSTISEISESTNIAVDGVNQAARNAEQGRSVVVTTVKNIDLLSSTLQKSQHSIGSL 407
           V +M + + E++ +     +  +Q+ + A +GR  VV TV  I  ++  +Q +   I  L
Sbjct: 305 VNEMTAAVEEVARNAVSTSEASSQSNQAAREGRDRVVETVGAIQTMTQDVQNTAAMIEGL 364

Query: 408 NAFVEKIGGAVSIIQGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLATRTHQST 467
                 IG  + +I+ IAEQTNLLALNAAIEAARAGE GRGFAVVADEVR+LA RT QST
Sbjct: 365 ATQGRDIGKVLDVIRAIAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRALAHRTAQST 424

Query: 468 EEITRVVSNIQSQMSQVVDDIDLCNNQGQETLSASRQLDESLQQILRDMHTIQDNSQRIA 527
           +EI ++V+ IQ+   + V  +   N + Q TL  +R    +L+QI + +  I + +  IA
Sbjct: 425 QEIEKMVAGIQNGTGEAVQSMQQSNQRTQTTLEMARAAGVALEQITQSISLINERNLVIA 484

Query: 528 AAIEEQGSVMNHVSESIAELNTISENNMRSAQQCLTEVDTVSRQAHAMDEAVAEF 582
           +A EEQ  V   V  ++  +  ++  +   A Q       +SR A  ++  VA F
Sbjct: 485 SASEEQAQVSREVDRNLVNIRDLATQSAAGANQTSAASHELSRLAVDLNGMVARF 539