Pairwise Alignments

Query, 414 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 405 a.a., multidrug resistance transporter, Bcr family from Caulobacter crescentus NA1000

 Score =  132 bits (331), Expect = 2e-35
 Identities = 101/395 (25%), Positives = 181/395 (45%), Gaps = 21/395 (5%)

Query: 22  KLTFFIAILAAVGQATQTMYVPSIGYMAQEFLVSPAALQAVMACYLIPYGLSQFVYGTLS 81
           +L   +  L A    +  MY+ S+  + +    +P   QA +A +     + Q  YG  S
Sbjct: 14  RLVLLLGALTAFAPMSIDMYLSSLPSIGRTLNAAPDQTQATLAAFFAGMAIGQVFYGPAS 73

Query: 82  DRIGRKPIIIAGLAIYIIGSLIALFAHQYSWFLIGSFVQGLGIGCGGAMSRTLSRDCFEG 141
           DR GR+P ++ G+ ++I  S++   A      +   FVQ LG   G  ++R + RD F  
Sbjct: 74  DRFGRRPPLLVGVGLFIAASIVCAVAPNIETLIAARFVQALGGCAGPVIARAVVRDRFSH 133

Query: 142 AELHKVNSLISMCLIFSPLVAPVLGGYLTESFGWRSSYLFLSLFAIAVVITMMTSMVET- 200
            +  +V SL+++ +  +P++AP LGG +    GWR  +  L +F + +   ++ S+ E+ 
Sbjct: 134 TDTARVLSLMTLIMGLAPVLAPQLGGVVQFVAGWRGVFWTLVMFGVLIAAWVVLSLTESR 193

Query: 201 ---LPATARKKEPVLRSYHYVLSDRRFQGYLICLVATFAGLAVFEAAAGVLLGGVLGLPA 257
                A AR + P L++Y  +   RR  GY +      A L  + + A  L+ G  G   
Sbjct: 194 SAATEAQARSENP-LKAYVALFGMRRLMGYALAGALNGAVLFTYISGAPDLVMGTYGHSP 252

Query: 258 TTVSLLFVLPIPGYLAGAWLSNVIARHWREKTAMHVGLLAILTGSLVIML---PGLLGMT 314
              +L+F L   G +  + ++  + R       +    +A +  +L++ L    G  G  
Sbjct: 253 LVFNLVFALNAVGIIGASQINRFLLRRSTPDQVLARASVASIVAALLLTLAAWTGFGGQW 312

Query: 315 TALSLIGGATIYFLGAGILFPAATTGALSPFPYHAGTGGAILGGMQNLGAGLATLF--AA 372
           T L L+  A   +   G++      GALS  P  AG+  A++G   + GAG    +  AA
Sbjct: 313 TVLPLLFAALSLY---GLMGGNTMAGALSVDPQRAGSTSALMGS-ASFGAGAVASWAGAA 368

Query: 373 MFPASDQLPLGIIM-------LLMSVLALWGLKRV 400
           +   + +   G++        L + +LAL G K++
Sbjct: 369 LHDGTPRPVAGVMFACLVGSALAIFLLALPGAKKI 403