Pairwise Alignments

Query, 469 a.a., deoxyribodipyrimidine photo-lyase from Vibrio cholerae E7946 ATCC 55056

Subject, 472 a.a., deoxyribodipyrimidine photo-lyase from Escherichia coli ECRC101

 Score =  444 bits (1143), Expect = e-129
 Identities = 236/471 (50%), Positives = 297/471 (63%), Gaps = 11/471 (2%)

Query: 3   LVWFRRDLRSFDNTALTAAL-NSGDPVAAMYIATPEQWHQHHLAPIQADLIWRRLAELQQ 61
           LVWFR+DLR  DN AL AA  NS   + A+YIATP QW  H+++P QA+LI  +L  LQ 
Sbjct: 5   LVWFRQDLRLHDNLALAAACRNSSARLLALYIATPRQWAAHNMSPRQAELINAQLNGLQI 64

Query: 62  ELAALNVPLFYQQVADFQAAAVAVSQLAKTLNATQVLANRDYELDEQQRDQLAQQLLSEQ 121
            LA   +PL +++V DF A+   V Q+    + T +  N  YE++E+ RD   ++ L  +
Sbjct: 65  ALAEKGIPLLFREVDDFAASVEIVKQVCAENSVTHLFYNYQYEVNERARDVQVERTL--R 122

Query: 122 GIIWSAFDDKCVLPPGSVRTKQGEFFKVFTPFKRAWLTLFQPPVIGKNRPVALWNVPSAL 181
            ++   FDD  +LPPG+V T   E +KVFTPFK AWL   +    G    VA   V S+ 
Sbjct: 123 NVVCEGFDDSVILPPGAVMTGNHEMYKVFTPFKNAWLKRLRE---GMPECVAAPKVRSS- 178

Query: 182 AELVWHPEQAFDYPR--IDSTPWAADFETVRAQLRDFCRERVQDYHQARDFPAREGTSSL 239
             +   P    +YPR   D+  +  + +   AQLR FC+    +Y Q RDFPA EGTS L
Sbjct: 179 GSIKPAPSITLNYPRQSFDTAHFPVEEKAAIAQLRQFCQNGAGEYEQQRDFPAVEGTSRL 238

Query: 240 SPYLAIGVLSARQCVARLYHESSMGELSEGAQVWLSELIWREFYQHLVAIEPNLSKSRDF 299
           S  LA G LS RQC+ RL  E           VWL+ELIWREFY+HL+   P+L K   F
Sbjct: 239 SASLATGGLSPRQCLHRLLAEQPQALDGGAGSVWLNELIWREFYRHLMTYYPSLCKHCPF 298

Query: 300 VEWGARLEWWNDNEKFQLWCEGKTGYPIVDAAMRQLNQTGWMHNRLRMIVASFLTKDLHI 359
           + W  R++W ++    Q W EGKTGYPIVDAAMRQLN TGWMHNRLRMI ASFL KDL I
Sbjct: 299 IAWTDRVQWQSNPAHLQAWQEGKTGYPIVDAAMRQLNSTGWMHNRLRMITASFLVKDLLI 358

Query: 360 DWRWGERYFMSRLIDGDYAANNGGWQWCASTGCDGQPYFRIFNPVSQGEKFDPNGDFIRR 419
           DWR GERYFMS+LIDGD AANNGGWQW ASTG D  PYFRIFNP +QGEKFD  G+FIR+
Sbjct: 359 DWREGERYFMSQLIDGDLAANNGGWQWAASTGTDAAPYFRIFNPTTQGEKFDREGEFIRQ 418

Query: 420 WVPELRSVSSAYIHQPWTYPAVNSVL--YPARLVDHKQEREVTLRLYKTAK 468
           W+PELR+V    +H+PW +     V   YP  +V+HK+ R  TL  Y+ A+
Sbjct: 419 WLPELRNVPGKSVHEPWKWAEKAGVKLDYPQPIVEHKEARVQTLAAYEAAR 469