Pairwise Alignments

Query, 530 a.a., thiamine/thiamine pyrophosphate ABC transporter permease ThiP from Vibrio cholerae E7946 ATCC 55056

Subject, 269 a.a., Polyamine ABC transporter, permease protein from Pseudomonas putida KT2440

 Score = 62.8 bits (151), Expect = 2e-14
 Identities = 61/273 (22%), Positives = 115/273 (42%), Gaps = 35/273 (12%)

Query: 1   MNRTPQLGFWVAAGV-ATFVLAALAALLWQS---------PPFNLNLIWQDAYYRH---- 46
           M R  + G ++  GV A F+L  +  ++  S         PP      W   ++ +    
Sbjct: 8   MGRPLRTGLYLTTGVIAAFLLLPVVFIVLLSFGSSQWLVFPPPGWTFKWYGQFFSNPEWM 67

Query: 47  -VTQFSFYQAFWSTVLSVGLAIPVAHALSQRRFPGRDLLLKLFAMTLVLPVLVAIFGLIA 105
                S   A  +T+ +V L +P A AL + RFPGR+LL  LF M +++P+++    + A
Sbjct: 68  DAALASLKVAVLTTIAAVLLGLPSAFALVRGRFPGRELLYGLFTMPMIVPLVIIAVAVYA 127

Query: 106 IYGNSGFLAKTLHSVGFPLPFSIYGLNGILLAHVLFNLPYASRLLLQSLEAIPSEQHKLC 165
           ++   G+                  L   +++HV+  LP+    ++ SL+          
Sbjct: 128 LFLKLGYTGT---------------LFAFVVSHVIVALPFTIISIINSLKLFDQSIEDAA 172

Query: 166 AHLGMSRWQKFKWVEWPRLRQQLPHVAGLVFMLCFTSFATVMA-LGGGPKATTIELAIYQ 224
              G SR Q    V +P +R  +  +AG +F    +    V++ +   P   T+ + ++ 
Sbjct: 173 VICGASRLQAIFKVTFPAIRPGM--IAGGLFAFLVSWDEVVLSVMMASPDLQTLPVKMWT 230

Query: 225 AIKFDFD--LQIGALLAIWQMLLCTLLTFTLQR 255
            ++ D    + + + L I   LL   +   L+R
Sbjct: 231 TLRQDLSPVIAVASTLLIGLSLLVMFIAAALRR 263



 Score = 43.5 bits (101), Expect = 1e-08
 Identities = 49/246 (19%), Positives = 107/246 (43%), Gaps = 25/246 (10%)

Query: 279 RAKVWDASWIVAACVLVLPPLVMVVLAGLNSK--------------LGKVLTSGDFWSAV 324
           R  ++  + ++AA +L+  P+V +VL    S                G+  ++ ++  A 
Sbjct: 13  RTGLYLTTGVIAAFLLL--PVVFIVLLSFGSSQWLVFPPPGWTFKWYGQFFSNPEWMDAA 70

Query: 325 SHSLQVASLASSLALASGIAMLLTSRALRLKAAHRRANGVEWIATLILVTPGLVVSTGLF 384
             SL+VA L +  A+  G    L S    ++        +  + T+ ++ P ++++  ++
Sbjct: 71  LASLKVAVLTTIAAVLLG----LPSAFALVRGRFPGRELLYGLFTMPMIVPLVIIAVAVY 126

Query: 385 LLLRNITDVFRLAYWIVVAVNALMALPYVVKTLSQPMWHLAQQYELLCASLGMSGWRRFR 444
            L   +     L  ++V  V  ++ALP+ + ++   +    Q  E      G S  +   
Sbjct: 127 ALFLKLGYTGTLFAFVVSHV--IVALPFTIISIINSLKLFDQSIEDAAVICGASRLQAIF 184

Query: 445 LVEWRALRKPLSHAFAIGFLLSMGDLSAIALFGSQDFRTLPLYLYQLLGSYQMDTAAVVA 504
            V + A+R  +       FL+S  ++    +  S D +TLP+ ++  L   + D + V+A
Sbjct: 185 KVTFPAIRPGMIAGGLFAFLVSWDEVVLSVMMASPDLQTLPVKMWTTL---RQDLSPVIA 241

Query: 505 LAMLIM 510
           +A  ++
Sbjct: 242 VASTLL 247