Pairwise Alignments

Query, 553 a.a., bifunctional UDP-sugar hydrolase/5'-nucleotidase from Vibrio cholerae E7946 ATCC 55056

Subject, 694 a.a., bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein (RefSeq) from Shewanella loihica PV-4

 Score = 89.7 bits (221), Expect = 3e-22
 Identities = 121/502 (24%), Positives = 188/502 (37%), Gaps = 75/502 (14%)

Query: 11  LSAAIIASLAGCATAPAQQWEADK----TYKLTILHTNDHHGRFWQNQYGE------YGM 60
           L A +IAS  G         + D       +L +L T D H       Y +       G+
Sbjct: 8   LLAVVIASSIGLTACSWNDDDEDTITSANVELRVLETTDLHTNIMDYDYYQSKVDPTIGL 67

Query: 61  AARKTLIDQLRADIEAQGGSVLLLSGGDINTGVPESDLQ--------DAEPDFKGMSKIG 112
           A   +LI   R +      + +L+  GD+  G P  D          D  P +K M+ + 
Sbjct: 68  ARTASLIHAARKEAT----NFVLVDNGDLLQGSPMGDYMAKIGLKEGDVHPAYKAMNTLD 123

Query: 113 YDAMALGNHEFDNPLEVLFKQKEWANFPMLSANIY--------DKATGKRLFEPYHI--- 161
           Y+   +GNHEF+  L+ L K    A FP ++AN+Y        D   G  LF PY I   
Sbjct: 124 YEVANIGNHEFNYGLDFLEKALSGAEFPYINANVYCAADDCWNDIKKGDNLFTPYLIKEK 183

Query: 162 --FDKQG----IKIAVIGLTTEDTAKIGNPEYIGGIDFRDPKEEAKKVIAELKKKEKPDL 215
              D QG    IKI  IG               G ++ +D  E AK  + ++ K E  D+
Sbjct: 184 VVIDTQGREHTIKIGYIGFVPPQIMLWDKQHLTGKVEAKDIIETAKLFVPKM-KAEGADV 242

Query: 216 IIAVTHMGHYQNGEHGVNAPGDVALARYLPAGELDMIVGGHSQEPVCMEGPNLVKKNFKP 275
           IIA+ H G   + E+  +A  + A         +D I+ GHS        P+    +  P
Sbjct: 243 IIAIPHSG-IGSTENPGDAMAENATFALTNVEGIDAIMFGHSHSIF----PHANYADL-P 296

Query: 276 GDECKPDIQNGTYIVQAYEWGKYVGRADYE--FRNGE----------------LNMVSYN 317
             + +  + NG   V    WG  +G  D +   ++G                  N V+  
Sbjct: 297 NTDVEKGLLNGVAAVMPGRWGDNLGVVDLKLTLKDGAWSVTDAQTEARPIYDGANKVALV 356

Query: 318 LIPVNLKKKVEVNGETQRVFATSEIKEDSA-MLEFLRPFQEKGQEQL--SIKIAHSNGKL 374
               ++   VE+  +    F    I   +A M  FL   Q+    Q+    +IA  + KL
Sbjct: 357 DADKDIHDAVELEHQGTLAFVDQPIGVAAADMYSFLTLVQDDPTVQIVSDAQIAQVSAKL 416

Query: 375 EGDRNVVRFEQTNLGRMIAMAHMQRAKADFAVMNSGGVRDSIQAGDITYKDVLKVQPFGN 434
                 +              H   A A   V         + AGD+T+K+   +  + N
Sbjct: 417 PESLQGIPVLSAAAPFKAGGRHATEADASQFV--------QVDAGDLTFKNAADLYLYPN 468

Query: 435 IVSYVDMNGQEVLDYLNVVATK 456
            +  V + G E+ D+L   A +
Sbjct: 469 TMVAVKITGVELKDWLECSANQ 490