Pairwise Alignments

Query, 339 a.a., outer membrane protein assembly factor BamC from Vibrio cholerae E7946 ATCC 55056

Subject, 362 a.a., outer membrane protein assembly factor BamC from Variovorax sp. OAS795

 Score = 48.9 bits (115), Expect = 2e-10
 Identities = 76/354 (21%), Positives = 137/354 (38%), Gaps = 45/354 (12%)

Query: 14  VLVLSACSSSPTQRRQAKDDFDYLETTEFKPWVLPQGATPQFYPN-YDIPQGA-----FH 67
           V  L+ACS   +      D  DY    +     +P   +     N Y +P GA     + 
Sbjct: 16  VASLAACSVLES------DKIDYKSAGKAPTLEVPPDLSQLSRENRYAVPGGAVTANAYQ 69

Query: 68  GGVGNVVDIRPPQQVLELIPGARAERQNGEVTLWMLRQDEAQKVWDTALKMIAERKIPLR 127
            GV N   +  P  V  L    R ER   +   W++      ++WD       E    L 
Sbjct: 70  AGVANAPGV--PTAVANL-GDVRMERSGTQ--RWIIVNRSPDQLWDPVKDFWQESGFLLT 124

Query: 128 KQTDSM--VETDWVDWVSE-DEDVTIGS--RYLMSMVETNNRYGFKISLIGWRENGQVQT 182
            +  ++  +ETDW +  ++  +D+  G+  + + S+  T     F+  L       ++  
Sbjct: 125 TEQRNLGIMETDWAENRAKLPQDIIRGTLGKLVDSVYSTGELDRFRTRLERTPTGTEIFI 184

Query: 183 VSTTNKERYNAFMTNLVTTR---YDSDVRAEAARR-------AQELVKQIPITMGSDRS- 231
                +E YN    +    +    D ++  E  RR       +QE  K I  T    ++ 
Sbjct: 185 SHRGMQEVYNNSRQDQTVWQPRPSDPELETEFLRRLMVKLGVSQEQSKIIASTSAPTKTA 244

Query: 232 ------GFPVIIARTPYDVLWQRLPELLPKMGFTIEERNQSQGTVKAKYAAPDDE----- 280
                 G PV+     +D  W+R+   L + GFT+E+R+++ G    +Y  P+ +     
Sbjct: 245 TVATVGGQPVVQISEGFDRAWRRVGLALDRTGFTVEDRDRTAGIYFVRYVTPNPDKKEPG 304

Query: 281 -FWQQVGVKPIELKSGTYTFLFGDLGNRTSINVTDSAGKPVNEALLKEMVPVLS 333
            F +  G          +  L    G  T+++V + +G P   A  + +V V++
Sbjct: 305 FFGKLFGSSTKNEAPIKFRILVKGQGESTTVSVLNESGAPETSANAQRIVQVIA 358