Pairwise Alignments

Query, 339 a.a., outer membrane protein assembly factor BamC from Vibrio cholerae E7946 ATCC 55056

Subject, 344 a.a., outer membrane protein assembly factor BamC from Escherichia coli ECRC99

 Score =  158 bits (400), Expect = 2e-43
 Identities = 98/335 (29%), Positives = 155/335 (46%), Gaps = 7/335 (2%)

Query: 8   VLGSLAVLVLSACSSSPTQRRQAKDDFDYLETTEFKPWVLPQGAT-PQFYPNYDIPQGAF 66
           V G   VL+L+ACSS    +RQ   D  YLE         P G   P    +Y IP    
Sbjct: 13  VAGVSLVLLLAACSSDSRYKRQVSGDEAYLEAAPLAELHAPAGMILPVTSGDYAIPVTNG 72

Query: 67  HGGVGNVVDIRPPQQVLELIPGARAERQNGEVTLWMLRQDEAQKVWDTALKMIAERKIPL 126
            G VG  +DIRPP Q L L+ GAR +   G+    ++       +W   + ++  +   +
Sbjct: 73  SGAVGKALDIRPPAQPLALVSGARTQF-TGDTASLLVENGRGNTLWPQVVSVLQAKNYTI 131

Query: 127 RKQTDS--MVETDWVDWVSEDEDVTIGSRYLMSMVETNNRYGFKISLIGWRENGQVQTVS 184
            ++ D+   + TDWV W   DED     RY +S+     +    + L+   + G+     
Sbjct: 132 TQRDDAGQTLTTDWVQWNRLDEDEQYRGRYQISVKPQGYQQAVTVKLLNLEQAGK-PVAD 190

Query: 185 TTNKERYNAFMTNLVTTRYDSDVRAEAARRAQELVKQ-IPITMGSDRSGFPVIIARTPYD 243
             + +RY+  M N+++   D     +AA  AQ      + +   +D +G P+++ R P++
Sbjct: 191 AASMQRYSTEMMNVISAGLDKSA-TDAANAAQNRASTTMDVQSAADDTGLPMLVVRGPFN 249

Query: 244 VLWQRLPELLPKMGFTIEERNQSQGTVKAKYAAPDDEFWQQVGVKPIELKSGTYTFLFGD 303
           V+WQRLP  L K+G  + +  +SQG +   Y    D  WQ++G     L SG Y    GD
Sbjct: 250 VVWQRLPAALEKVGMKVTDSTRSQGNMAVTYKPLSDSDWQELGASDPGLASGDYKLQVGD 309

Query: 304 LGNRTSINVTDSAGKPVNEALLKEMVPVLSAVVDK 338
           L NR+S+   D  G  + ++    +V V  A   K
Sbjct: 310 LDNRSSLQFIDPKGHTLTQSQNDALVAVFQAAFSK 344