Pairwise Alignments

Query, 588 a.a., succinate dehydrogenase flavoprotein subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 535 a.a., L-aspartate oxidase (RefSeq) from Shewanella amazonensis SB2B

 Score =  222 bits (566), Expect = 3e-62
 Identities = 178/563 (31%), Positives = 263/563 (46%), Gaps = 69/563 (12%)

Query: 9   DAVVIGAGGAGMRAALQISEQGLTCALLSKVFPTRSHTVSAQGGITVALGNSHKDDWQWH 68
           D +VIG+G AG+  AL ++E+     L+SK   +   T+ AQGGI         D  + H
Sbjct: 10  DILVIGSGAAGLTLALHLAEKAKVI-LISKGPLSEGSTLYAQGGIASVFDEG--DTIESH 66

Query: 69  MYDTVKGSDYIGDQNAIEYMCKNGPESVIELERMGLPFSRFENGTIYQRPFGGQSKEFGG 128
           + DT+     I D+  + Y   N   ++  L   G+PF + E+ T   +P+       GG
Sbjct: 67  VEDTLVAGAGICDETVVTYTAANAKAAMQWLISCGVPFDKEEHITNEAQPY--HLTREGG 124

Query: 129 EQAARTAAAADRTGHALLHTLYQQNVKHKTTIFSEWY-ALDLVKNQD-----GAVLGCTA 182
               R   AAD TG A+  TL +    H      E Y A+DL+  +        VLG   
Sbjct: 125 HSHRRILHAADATGKAVQTTLQELAANHPNIQVLERYNAIDLITTRKLGRTGNRVLGAYV 184

Query: 183 ICMETGEICYFKAKATVLATGGAGRIYASTTNAHINTGDGVGMALRAGVPMQDMEMWQFH 242
                 ++   KA+   LATGG+ ++Y  T+N  + +GDG+ MA RAG  + +ME  QFH
Sbjct: 185 WNRSQEQVETVKARFVALATGGSSKVYQYTSNPDVASGDGIAMAWRAGCRVANMEFNQFH 244

Query: 243 PTGIAGA---GVLVTEGCRGEGGYLLNKDGERFMERYAPNAKDLAGRDVVARSMMIEI-R 298
           PT +  A     L+TE  RGEG YL   DG RFM  +   A +LA RD+VAR++  E+ R
Sbjct: 245 PTCLYHAEARNFLLTEALRGEGAYLRRPDGSRFMPDFDERA-ELAPRDIVARAIDYEMKR 303

Query: 299 EGRGCDGPWGPHIKLKLDHLGRDVLESRLPGICELSRTFAHVDPVKEPIPVIPTCHYMMG 358
            G  C       + L + H   D +    P I         +D  KEPIP++P  HY  G
Sbjct: 304 LGVDC-------MYLDISHKPADFIIKHFPTIHSRCLELG-LDITKEPIPIVPAAHYTCG 355

Query: 359 GVPTQVSGQAIKQDSHGKDVEVQGLFACGEIASVSVHGANRLGGNSLLDLVVFGRATGLH 418
           GV T + GQ           ++ GL+A GE+A   +HGANRL  NSLL+ +VF R     
Sbjct: 356 GVMTDLHGQ----------TDLNGLYAIGEVAYTGLHGANRLASNSLLECLVFAR----- 400

Query: 419 LGETLRAQAEARPATASDIEASLARTM------RWENSK--GGEDPVVIR---KDLQRCM 467
                        A A DIE+ + +         W+ S+    ++ VVI     +L+  M
Sbjct: 401 -------------AAAQDIESLMGKIAMPGQLPAWDESRVSNSDEEVVIAHNWHELRLFM 447

Query: 468 QNNFSVFREGKAMAEGLEELKVIRERLKNAHLADKSTEFNTQRIECLELDNLMETAFSTA 527
            +   + R  K +   L  + ++++ ++  +     + F       LEL NL++ A    
Sbjct: 448 WDYVGIVRTDKRLERALRRVTMLQQEIQEYY-----SNFRVSN-NLLELRNLVQVAELII 501

Query: 528 VAANYRTESRGAHARFDYPERDD 550
             A  R ESRG H   D+PE+ D
Sbjct: 502 RCAMARKESRGLHCNLDHPEKLD 524