Pairwise Alignments

Query, 405 a.a., NupC/NupG family nucleoside CNT transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 437 a.a., Nucleoside permease NupC from Sphingobium sp. HT1-2

 Score =  381 bits (978), Expect = e-110
 Identities = 209/437 (47%), Positives = 291/437 (66%), Gaps = 36/437 (8%)

Query: 5   MSSLLGMGAILLV---AWLFSTNRKNINLRTVSLALLLQIFFALLVLYVPAGKEALNRVT 61
           M  L+G+  ILL+   A+  S+NR+ I LR V  A LLQ   ALLVLYVPAG+  +  ++
Sbjct: 1   MHLLIGLAGILLILAIAFALSSNRRAIRLRVVGAAFLLQAGIALLVLYVPAGRAIIAGMS 60

Query: 62  GAVSQLINYGQDGIGFVFGGLANGSVGFV-FAINVLGIIIFFSALISGLYHLGIMPKVIN 120
             V+ L+ Y Q G  F+FG LA   +G   FAI  L +IIFF++L+S LY+LGIM  ++ 
Sbjct: 61  HGVANLLGYAQAGTNFIFGPLAKPEIGGASFAIAALPVIIFFASLVSILYYLGIMQFIVR 120

Query: 121 LIGGGLQKLLGTGRAESLSATANIFVGMIEAPLVVKPYLHKMTDSQFFAVMTGGLASVAG 180
            +GG ++K+ G  + ESL A ANIFVG  E+PLV++PYL  +   Q FAVMT G+A VAG
Sbjct: 121 WVGGAIEKVTGVSKVESLCAAANIFVGQSESPLVIRPYLAGLNGPQLFAVMTSGMAGVAG 180

Query: 181 GTLVGYASLGVELNYLIAAAFMSAPAGLLMAKIMLPETEHVDAAI-AQDELDLP------ 233
             L  YAS+G++++YL+AA+FM+AP GLLMAKIM+P+    +  +  +D++ LP      
Sbjct: 181 TILAAYASMGIKIDYLLAASFMAAPGGLLMAKIMMPDEPECEPELPLEDDIHLPETRRAA 240

Query: 234 ------------------------KSTNVVEAIADGAMSGVKIAVAVGATLLAFVSVIAL 269
                                   K  N++ A A GA +GVK+AVAVGA +LAFV+++AL
Sbjct: 241 AVAAVLNAETTPGEPMPVATHDEEKPANIIMAAAQGAQTGVKLAVAVGAMVLAFVALVAL 300

Query: 270 LNGLLGWFGGWFGI-ELSFELIMGYVFAPVAWLIGIPWHEAITAGSLIGNKVVVNEFVAF 328
            NG+LG  GG FG  ELSF+ ++GYVF+PV +L+ IPW+EA  AG L G KVV+NEFVA+
Sbjct: 301 ANGILGGIGGIFGYPELSFQQLLGYVFSPVMYLLNIPWNEAQVAGGLFGTKVVLNEFVAY 360

Query: 329 IQLIEVKEQLSAHSQAIVTFALCGFANISTMAILIGGLGSLVPERRSFISQYGFRAIGAG 388
           I L +V++ LS  + AI+TFALCGFAN S++AI +   G+L P +R  I++ G +A+ AG
Sbjct: 361 INLGQVQDGLSPSTIAIITFALCGFANFSSIAIQMAVTGNLAPNQRPMIAKLGLKALVAG 420

Query: 389 VLANLMSASIAGVILSL 405
            LANLMSA++AG++LSL
Sbjct: 421 SLANLMSAALAGLMLSL 437