Pairwise Alignments

Query, 487 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 407 a.a., 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase from Pseudomonas simiae WCS417

 Score = 53.9 bits (128), Expect = 1e-11
 Identities = 89/358 (24%), Positives = 136/358 (37%), Gaps = 50/358 (13%)

Query: 7   DIVIIGAGPVGLMSAYLAQRCGLNALIIDKSAEPLQVG----------RADALNARTLQL 56
           D++I+GAG VG   A   Q  GL  L++D S  PL V           R  AL+A + ++
Sbjct: 6   DVLIVGAGMVGSALALALQGSGLQVLLLDGS--PLSVKPFDRDAAFEPRVSALSAASQRI 63

Query: 57  LEVAKLFDDLYPL-GKPCNTSSVWANG-----HFISRQSSWWEALEGCLHKHFLMLGQSF 110
           LE   ++D +      P     VW        HF S  S   E L   +    +      
Sbjct: 64  LERLGVWDGIVSRRASPYGEMQVWDGSGTGQIHF-SAASVHAEVLGHIVENRVVQ----- 117

Query: 111 VEQLLDKKLLEANAPVWRNTSVDNIELNQAGCLTHLSNGELIQSRFVIGADGSQSFVRRH 170
            + LLD+ L + +  +  N  ++ +  +    L  L++G  +++  V+ ADG+ S VRR 
Sbjct: 118 -DALLDR-LHDCDLGLLANARLEQMRRSGDDWLLTLADGRTLRAPLVVAADGANSAVRRL 175

Query: 171 FNV---PFHIVRPEIIWAVIDG-----------VIDSDFPKVPEIIVFQAETSDVAWIPR 216
                  +  +   I+ +V                      +P +   Q +   + W   
Sbjct: 176 TGTATREWDYLHNAIVTSVRSSEPHQRTAWQRFTDTGPLAFLPLVRDGQEDWCSIVWSTT 235

Query: 217 EGEIDRFYVRMDTHDFTLEQAIAKINRAMAPHQLGFKEVVWFSQFAVKESVAEHYSVDDR 276
             E +R  + +D   F  E   A   R         +  V   Q   K  VAE  +    
Sbjct: 236 PAESERL-MALDDESFCRELERAFEGRLGTVLSADPRVCVPLRQRHAKRYVAEGLA---- 290

Query: 277 VFLAGDACHVHSVNGGQGLNTGVADAFNLI-WKLSMVIKGQ--ASPALLKSYHAERQP 331
             L GDA HV     GQG+N G  DA  L    LS   +G+  A   +L  Y   R P
Sbjct: 291 --LIGDAAHVIHPLAGQGVNLGFLDAATLAEVLLSATERGERLADVKVLSRYERRRMP 346