Pairwise Alignments
Query, 672 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056
Subject, 536 a.a., Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) from Pseudomonas fluorescens FW300-N2E2
Score = 220 bits (561), Expect = 1e-61
Identities = 131/410 (31%), Positives = 225/410 (54%), Gaps = 3/410 (0%)
Query: 263 LDQHNEYLQARAALYNNIANLANEVDKAMTILGAFNQTATDDLNQSLAEAGSVYQQGAIK 322
L ++N+ + RA L + + ++ ++ A+ L N + LN+ A+ S +
Sbjct: 130 LSRNNQVDELRALLNTELLSNSDAINAAIDRLVEINNLQAEALNKGAAQQYSSAFNWVVT 189
Query: 323 AVVIGIAVVLLATAIGYHIAHSVREPVTRILKTLESLTQGNMTQRIEIRYNNEFSRLSRH 382
++I + LL + + +S+ +P+ L E + +GN+T+ I + ++E RL R
Sbjct: 190 LLLIATGLTLL---FAWLLTNSITKPIANALDAAEEIAKGNLTRPITVDGSDEAGRLLRA 246
Query: 383 INSLADNLHDILVKLNSASDDLTATASTNQTTSLSAQNKLNSQREQTSSVAAAMTEMAHS 442
++++ + L D L +++ ++ L + A + + + L Q + A A+ EM +
Sbjct: 247 MSTMQEKLRDTLQRISGSATQLASAAEELNSVTDESARGLTQQNNEIEQAATAVNEMTSA 306
Query: 443 VQEVANSAQNSLAMVQQVETASESGRQIMSTNISTIRQLETRLIESVEAVGDLRKMSSQI 502
V+EVA +A ++ + T++ GR ++ +S I ++ + + +G+L S I
Sbjct: 307 VEEVARNAVSTSEASKNATTSAGDGRDLVQETVSAIERMSADVQSTAALIGNLADESRDI 366
Query: 503 GSILDVIRNIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRVLAQRTTQSTSEIESMI 562
G +LDVIR +A+QTNLLALNAAIEAARAGE GRGFAVVADEVR LA RT QSTSEIE MI
Sbjct: 367 GKVLDVIRGLADQTNLLALNAAIEAARAGEAGRGFAVVADEVRALAHRTQQSTSEIERMI 426
Query: 563 SNLQSSSSLASKVIESCMQDMELSVEQASHANSAMEEIQALIIEISHMSTHISQAAGEQN 622
++QS + A + + + E ++ A A +++ I I+EI+ + I+ AA EQ
Sbjct: 427 GSIQSGTEHAVDSMRNSTERAESTLNIARGAGMSLDTINTAIVEINERNLVIASAAEEQA 486
Query: 623 ETTTSIARSIEDINHISDESYQAMSQIAQTSANLTALANQQSELVHRFKL 672
+ + R++ +I +S +S +Q + SA L+ LA + +V RF L
Sbjct: 487 QVAREVDRNLVNIRDLSVQSATGANQTSAASAELSRLAVDLNNMVGRFSL 536
Score = 31.2 bits (69), Expect = 1e-04
Identities = 102/560 (18%), Positives = 210/560 (37%), Gaps = 79/560 (14%)
Query: 13 SVIRRMYAGFALIIIMFVVTVAIMLRGMNQIHSNFESVSTAALPLVSLSNQ-TSVQLLSA 71
++ R + GFALI + + L M++I ++ E+++ ++P + N+ T + L
Sbjct: 2 NIAPRAFLGFALIGALMLALGVFALTQMSKIRTSGENIAQNSVPSIKALNEFTQLTLRLR 61
Query: 72 DKSFKDFLT-----TQDTSLMDGMRQEFAQSKQRFQSVLAELSQASVNHPELAQPITELK 126
S++ + Q T + R + ++ Q L S + +L Q + + +
Sbjct: 62 VLSYRLLVNREPDIQQKTYDLVEQRSQQIRAAQTTYEKLISASDERAAYDQLVQLLGQYR 121
Query: 127 QLETRYFS-EADLAMDNYQAMF---------AAQASVQKSTREFQRLHSE-LSVGMKEFV 175
QLE R + + +D +A+ A A++ + E L +E L+ G +
Sbjct: 122 QLEERMKTLSRNNQVDELRALLNTELLSNSDAINAAIDRLV-EINNLQAEALNKGAAQQY 180
Query: 176 DDNDSISVKVMAKSYFIKLKDAEVITSD---ALASSDVAFVEKAVNQNKKAVT-----HL 227
+ V ++ + + L A ++T+ +A++ A E A + +T
Sbjct: 181 SSAFNWVVTLLLIATGLTLLFAWLLTNSITKPIANALDAAEEIAKGNLTRPITVDGSDEA 240
Query: 228 NYAYRGLTTQMPQLKERFDEPVAKFTQ------------DIGQKGGVLDQHNEYLQARAA 275
R ++T +L++ TQ D +G L Q N ++ A
Sbjct: 241 GRLLRAMSTMQEKLRDTLQRISGSATQLASAAEELNSVTDESARG--LTQQNNEIEQAAT 298
Query: 276 LYNNIANLANEVDKAMTILGAFNQTATDDLNQSLAEAGSVYQQGAIKAVVIGIAVVLLAT 335
N + + EV + ++ AT + A G Q + A+ A V
Sbjct: 299 AVNEMTSAVEEVARNAVSTSEASKNAT-----TSAGDGRDLVQETVSAIERMSADVQSTA 353
Query: 336 AIGYHIAHSVREPVTRILKTLESLTQGNMTQRIEIRYNNEFSRLSRHINSLADNLHDILV 395
A+ ++A R+ + ++L + L + T + + E +R A
Sbjct: 354 ALIGNLADESRD-IGKVLDVIRGL--ADQTNLLALNAAIEAARAGEAGRGFA-------- 402
Query: 396 KLNSASDDLTATASTNQTTSLSAQNKLNSQREQTSSVAAAM---TEMAHSVQEVANSAQN 452
+D++ A A Q ++ + + S + T +M TE A S +A A
Sbjct: 403 ---VVADEVRALAHRTQQSTSEIERMIGSIQSGTEHAVDSMRNSTERAESTLNIARGAGM 459
Query: 453 SLAMVQQ-----------VETASESGRQI---MSTNISTIRQLETRLIESVEAVGDLRKM 498
SL + + +A+E Q+ + N+ IR L ++S
Sbjct: 460 SLDTINTAIVEINERNLVIASAAEEQAQVAREVDRNLVNIRDLS---VQSATGANQTSAA 516
Query: 499 SSQIGSILDVIRNIAEQTNL 518
S+++ + + N+ + +L
Sbjct: 517 SAELSRLAVDLNNMVGRFSL 536