Pairwise Alignments

Query, 334 a.a., Holliday junction branch migration DNA helicase RuvB from Vibrio cholerae E7946 ATCC 55056

Subject, 346 a.a., Holliday junction DNA helicase RuvB from Xanthomonas campestris pv. campestris strain 8004

 Score =  452 bits (1164), Expect = e-132
 Identities = 221/322 (68%), Positives = 273/322 (84%)

Query: 12  SNHFKDEEVIDRAIRPKKLADYQGQDHVRDQMEIFIQAAQMRQEALDHLLIFGPPGLGKT 71
           S+  +++E  D +IRPK+LADY GQ  VRDQMEI+IQAA+ R EA+DH+LIFGPPGLGKT
Sbjct: 9   SSATREDEAADASIRPKRLADYLGQQPVRDQMEIYIQAAKARGEAMDHVLIFGPPGLGKT 68

Query: 72  TLANIVANEMGVNIRTTSGPVLEKAGDLAALLTNLEENDVLFIDEIHRLSPMVEEVLYPA 131
           TL++++ANE+GVN+R TSGPV+EKAGDLAALLTNL+ +DVLFIDEIHRLSP+VEEVLYPA
Sbjct: 69  TLSHVIANELGVNLRVTSGPVIEKAGDLAALLTNLQPHDVLFIDEIHRLSPVVEEVLYPA 128

Query: 132 MEDYQLDIMIGEGPAARSIKIDLPPFTLIGATTRAGSLTSPLRDRFGIVQRLEYYKVADL 191
           MED+Q+DIMIG+GPAARSIKIDLPPFTLIGATTRAG LT+PLRDRFGIVQRLE+Y   +L
Sbjct: 129 MEDFQIDIMIGDGPAARSIKIDLPPFTLIGATTRAGLLTAPLRDRFGIVQRLEFYSPQEL 188

Query: 192 QHIVQRSAQCLGLSMDSEGALEVARRARGTPRIANRLLRRVRDYAEVKGDGHICAQTADR 251
             IV RSA  LG+    +GA E+ARRARGTPRIANRLLRRVRD+A+VK  GHI    A  
Sbjct: 189 TRIVIRSAAILGIDCTPDGAAEIARRARGTPRIANRLLRRVRDFAQVKAAGHIDLAVAQA 248

Query: 252 ALNMLDVDHQGFDYMDRKLLLAIMEKFSGGPVGIDNLAAAIGEEKDTIEDVLEPFLIQQG 311
           A+ ML VD +GFD +DR++L  I++ F GGPVG+++LAA++ EE+ T+EDV+EP+LIQQG
Sbjct: 249 AMQMLKVDPEGFDELDRRMLRTIVDHFDGGPVGVESLAASLSEERGTLEDVIEPYLIQQG 308

Query: 312 YLQRTPRGRIATDRAYLHFGIE 333
           +L RT RGR+ T +AYLH G++
Sbjct: 309 FLIRTARGRMVTPKAYLHLGLK 330