Pairwise Alignments

Query, 736 a.a., histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 622 a.a., sensory box histidine kinase/response regulator from Pseudomonas fluorescens FW300-N2E2

 Score =  224 bits (571), Expect = 1e-62
 Identities = 131/397 (32%), Positives = 219/397 (55%), Gaps = 11/397 (2%)

Query: 343 LEAEKVKAQASTKAKSAFLATLSHEIRTPMNGVLGTAQILLKDELTSKQRQHLTSLYESG 402
           L   K  A+ + ++K++FLAT+SHEIRTPM GV+G  ++L +  L  +QR+ LT+++ SG
Sbjct: 220 LNQAKNAAEDADRSKTSFLATMSHEIRTPMYGVIGATELLARSALDPEQRRLLTTIHSSG 279

Query: 403 EHMMSLLNEILDYSKIEQGKFELDHSAFPLKSIIGSIKSIYSSLCVEKGLKFQLNSEITD 462
             ++SL++ ILD +KIE GK EL    F +++++ S   +      +K +  +       
Sbjct: 280 RTLLSLIDNILDLAKIEAGKLELKPRVFEVRALVSSCMELIRQNIQDKPIVLEAQFSPDV 339

Query: 463 GRWYYGDKARLRQIIFNLLSNAVKFTEAGFVAIGLSEESCDEENYLIIKVQDTGIGIAQE 522
                 D   LRQ++ NLL NAVKFTEAG +++ ++      + +L   ++DTGIGI  E
Sbjct: 340 PPLVKTDMDCLRQVLINLLGNAVKFTEAGKISLLVTTSGYGSQAWLDFSIRDTGIGIPTE 399

Query: 523 SLGRIFRPFEQAESHTTRRFGGTGLGLAIVKQIAELMNGTVLVQSEVGQGSCFKVRVKLA 582
               +F+PF Q +   ++RF G+GLGL+I K + E   GT+   S+ G GS F   + LA
Sbjct: 400 RQDNLFKPFVQFKGAASQRFTGSGLGLSICKNLLEAQQGTLTFTSQPGLGSTFSFSLPLA 459

Query: 583 ITE----PVTED-----VKPTKAKTYPGLRVLIVEDNRTNIMILEAFMRNKGFECHSVMD 633
           +      P+ +D        + A+ YP L +L+VE++  +  +  A ++  G+      D
Sbjct: 460 LFSVSEIPIKDDHAAVGFDSSFAEDYP-LDILLVENHPVSQKVAMAMLQELGYTPDLASD 518

Query: 634 GVQAITALQESSFDLVLMDNHMPLKDGIQATREIRQLPLPQAKILLFGCTADVFKDTRDK 693
           G++A+     S+ +++LMD +MP+ DG++A R IR+LP       +   TA VF    ++
Sbjct: 519 GLEAVNRCMASTPEIILMDINMPVMDGMEAVRRIRELPQGDT-CYIVAFTASVFSSEIER 577

Query: 694 MLSAGADDIIAKPIAEHELDMALEQHSERLYQFHREP 730
             + GADD++ KP     L   L++ +   +Q    P
Sbjct: 578 FRAGGADDVLTKPANFQALTRVLQRAASHRHQRQATP 614