Pairwise Alignments

Query, 427 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 427 a.a., TRAP dicarboxylate transporter, putative (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  242 bits (618), Expect = 1e-68
 Identities = 145/417 (34%), Positives = 227/417 (54%), Gaps = 4/417 (0%)

Query: 11  LLFAGMPVGFSLIFVALAFLILTNSTGINFAAQQMLGGIDNFTLLAVPFFVLTGHLMNSA 70
           ++F G+P+  ++   A    I     G+      +  G+  + LLA+P F+  G +   +
Sbjct: 12  MMFIGVPLATAMGLSATV-AIAAAKLGLLSVPISVYTGVAKYPLLAIPMFIFAGMVFERS 70

Query: 71  GITERIFNFAKSLVGHITGSLGHVNIMASLLFSGMSGSALADAGGLGQLEIKSMRDAKYH 130
           G+  R+ NF  +LVG + G L   +IM  ++  G+SGS  ADA  +  + I  M  A Y 
Sbjct: 71  GVALRLVNFTVALVGPLRGGLAIASIMVCMVLGGISGSGPADAAAVAMVMIPGMAAAGYP 130

Query: 131 DDFAGGLTAASCIIGPLVPPSVPLVIYGV-VSNTSIGALFLAGAIPGLLCCIALMVMSYF 189
             F+ GL AA+     L+PPS+  ++Y V V   S+ ALF AG IPG L  IAL++ ++ 
Sbjct: 131 KAFSAGLIAAAGSTAILIPPSIAFILYSVLVPQASVPALFAAGLIPGFLAGIALIIPAWA 190

Query: 190 ICKKRGY-MTLPKASRREQFKSLKEAFLSLLTPVIIIGGIFSGKFTPTEAAAVSSLYALF 248
           +  + G+ +    AS      + KEA   LL PVII+GGI SG FTPTEAA  +  Y LF
Sbjct: 191 LSVRHGFGLVGDDASCGSILIAFKEAIWGLLAPVIILGGIRSGYFTPTEAAVAAVFYGLF 250

Query: 249 LGTVVYNTLTLQGFIEILKETVNTTAVVALMVMGVTVFGWIVAREQLPQMLADYFLTISD 308
           +G  VY TLTL+G  E+L E+   +AVV +++   +VF W  +     + + +  + IS 
Sbjct: 251 VGFFVYRTLTLRGIYELLVESAEVSAVVMMIIALSSVFAWAGSTLGAFEAMGNALIGIST 310

Query: 309 NPLVLLLLINLLLLFLGTFIESLALLLLLVPFLVPVASAVGIDPVHFGVMAILNLMIGIL 368
           +  + LL + L+L+  G F++ +++L + +P L+PV +  G + V FGV+  + L IG  
Sbjct: 311 SETMTLLAVVLVLIIAGMFLDGVSILFIFIPILLPVMTHFGWNAVWFGVIMTMCLAIGQF 370

Query: 369 TPPMGMALYVVSRVGDIPFHTLTRGVLPLLVPLFIVLALVAVFPQFTLLLPELFLGY 425
           TPP+ + L V +R+ DI        VL  ++ + I + LV   PQ   L+P   LGY
Sbjct: 371 TPPLALNLMVTTRIADIGIEETVPWVLWFVLAMTIAMLLVVFVPQLATLVPG-HLGY 426