Pairwise Alignments

Query, 1037 a.a., AcrB/AcrD/AcrF family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1065 a.a., NolG efflux transporter from Sinorhizobium meliloti 1021

 Score =  269 bits (687), Expect = 9e-76
 Identities = 247/1029 (24%), Positives = 456/1029 (44%), Gaps = 51/1029 (4%)

Query: 27   INNRVISWMVSLIFLIGGTAAFFNLGRLEDPAFTIKDAMVVTSYPGATPQQVEEEVTYPL 86
            IN+ V + M+ ++ L+ G  ++  LG    P   +   +V T+Y GA+P+ VE E++ P+
Sbjct: 8    INHPVFATMMMVMILVLGLFSYGRLGVDHYPETDLPVVVVATTYTGASPESVESEISRPI 67

Query: 87   EKAIQQLTYVDEVNSISSRGLSQITVTMKNNYGPDDLPQIWDELRRKVNDLKGALPPGVN 146
            E A+  +  +D + S S  G S + V  + +    D  Q   E+R +V  L+   P GV 
Sbjct: 68   EAALNTIGGIDTITSESYEGRSIVVVQFEVDVDSQDAAQ---EVRDRVARLETKFPDGVA 124

Query: 147  PPLVIDDFGDVYGIL-LAVTGEGYSYKELLDYVD-YLRRELELIDGVSKVSVSGQQQEQV 204
             P V     +   IL +AV+    +  E+       +   L +I GV +VS+ G  + QV
Sbjct: 125  TPQVTRYKPEGQAILSVAVSSTSRTLPEITTLATRVINNRLSVISGVGQVSLIGSSERQV 184

Query: 205  FIEISMKRISTLGISPQTVFNLLSTQNLVSDAGAIRIGSEYIRIHPTGEFDDVEKLGDLI 264
             + +   R+   G++  TV   +  +N    AG +  G     +   G   +      +I
Sbjct: 185  LVVVDPDRLGAYGLAVSTVIEAIRGENQDRAAGTLISGINQRIVTVEGRIANTSGFNRII 244

Query: 265  LSERGAQGLIYLRDVAEVKRGYVEVPSNVITFNGKLALNVGVSFAQGVNVVEVGQRFDRR 324
            +++R     +YL +VA +     EV S +  + G+  L + +   QG N VEV     R 
Sbjct: 245  VAQRNGYP-VYLSEVATILDTGAEVTS-LANYQGQTTLGLHIVKVQGANTVEVASAVRRE 302

Query: 325  LAELKYQ---QPIGIDIAEVYSQPKEVDKSVSGFVVSLGQA-VAIVIIVLLFFMGLRSGL 380
            ++ L  +     + + I    S+P  +   VS    +L +  V  V+IV +F    RS +
Sbjct: 303  VSALNAELTKDNVQLTITRDNSRP--IASQVSQVQRTLVEGGVLSVLIVFIFLNSWRSTV 360

Query: 381  LIGLILLLTVLGTFIFMQYFKIDLQRISLGALVIALGMLVDNAIVVVEGILIGTQKGRTR 440
            + GL L ++V+GTF  +      L  ++L AL +++G+L+D+AIVV E I    Q G+  
Sbjct: 361  ITGLTLPISVIGTFAAIYALGFTLNIMTLMALSLSIGILIDDAIVVRENITRHLQMGKDP 420

Query: 441  LQAATDIVTQTKWPLLGATVIAVTAFAPIGLSEDATGEYCGTLFTVLLISLMLSWFTAIS 500
            ++AA D   +    +L  T+  V  F P+       G +       + +++++S F + +
Sbjct: 421  VRAALDGTNEIGLAVLSTTLCIVAVFLPVAFMGGLIGRFFLQFGVTVAVAVVISLFVSFT 480

Query: 501  LTPFFADLFF--RGQKAPASG------EESDPYQGFIFVVYRRFLEFCMRRAWLTMGVLV 552
            L P  + ++   + QK    G      E  D +   +   YR  + F       T+ +++
Sbjct: 481  LDPMLSSVWCDPQSQKTAKRGFFGQLIERFDQWFEGLASRYRSVIYFTFDYRKTTIAIVL 540

Query: 553  LGLAASLYGFTKVKQAFFPSSTTPMFMVDVWMPEGTDIRATDAILLELEKWLSAQESVDS 612
                 SL    ++   F P        + +   EG  +    A + ++E+ L     V S
Sbjct: 541  GMFVVSLLLVPRIGTEFLPPPDQGEVSISLEANEGASLDYMAAKVGQIERALREFNYVSS 600

Query: 613  VTTTAGKGLQRFMLTYSPEKSYAAYGEITT---RVTDYQQLAALMARFRAHLDARYPQIN 669
              +T   G  R        K+  A   + +   R+   + L  +  R      +R   + 
Sbjct: 601  TYSTINSGEMRGF-----NKALVAVQLVHSSQRRLKTAETLGPIRRRL-----SRIAGLE 650

Query: 670  YKLKQIELGPGGGAKIEARIVGSDPTVLRSIAAQVMDVMYADPGAYNIRHDWRERTKVLE 729
              + Q     G    ++  I+G     LR I+  +  V+ A PGA  I     +    L 
Sbjct: 651  ISVGQRSEVVGSIKPLQLSILGDGDEELRRISDHITSVLAAIPGATEIESSIEKLRPTLA 710

Query: 730  PQFNESQARRYGITKADVDEFLAMSFSGKTIGVYR--DGTTLMPIVARLPEEERVDIRNI 787
             +     A   G++ A + + L    +G  I V+   DG T   +V RLP   R +   +
Sbjct: 711  VRVRREAASDLGVSIATIGDTLRSLVAGDAISVWNSPDGET-HDVVVRLPAAGRENAAQL 769

Query: 788  EGMKIWSPALSE-----YIPLQQVTLGYEMRWEDPLIVRKNRKRMLTVMADPDLLGEETA 842
              + I +  + +      + L QV    E       I RK+  R + + ++   +   T 
Sbjct: 770  RNLPIATARMDDNGKPIMVLLDQVADVVEST-APAQITRKDLSRDIRISSN---IEGRTL 825

Query: 843  ATLQQRLQPQIEAIPLPPGYFLEWGGEYESSGDAKASLFKTMPLGYLFMFLITVFLFNSV 902
              +   L+  +  + +P G+ + +GG+ E+  ++ A   +++ +  +F+++I    F S 
Sbjct: 826  GDVVADLKAAMTKMDIPVGFRISFGGDAENLTESTAYALQSLAMAVIFIYIILASQFGSF 885

Query: 903  KESLIVWLTVPLAVIGVTTGLLALNTPFGFMALLGFLSLSGMLLKNGIVLLDQIEIEMHS 962
             + + + +T+PL+++GV  GLL   +     +++G + L G++ KN I+L+D   + +  
Sbjct: 886  IQPIAIIMTMPLSLMGVLLGLLFTGSTLNMFSMIGIMMLMGLVTKNAILLVDYSNLGVRE 945

Query: 963  GKDPYLAVVDASLSRVRPVCMAAVTTILGMIPLLPDI-----FFRPMAVTIMFGLGFATV 1017
            GK    ++ DA   R+RP+ M  +  I GM+P    +        PMA  I+ GL  +T+
Sbjct: 946  GKSLRQSLADAGAVRLRPIVMTTLAMIFGMLPTALGLGEGGAQRAPMAHAIIGGLISSTL 1005

Query: 1018 LTLIVVPVL 1026
            L+L+ VPV+
Sbjct: 1006 LSLVFVPVV 1014