Pairwise Alignments

Query, 448 a.a., sodium-dependent transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 473 a.a., Na+-dependent transporters of the SNF family protein from Alteromonas macleodii MIT1002

 Score =  267 bits (682), Expect = 6e-76
 Identities = 164/467 (35%), Positives = 267/467 (57%), Gaps = 37/467 (7%)

Query: 7   SGSRGQFTSRFGFIMAAAGSAVGLGNVWGFPTQAASNGGAVFLLVYLCMVFLLAYPMLVA 66
           SG+R QF SR GFI+AAAGSAVG+GN+ GFP  AA NGG  FLL+Y   VF +  P+++A
Sbjct: 2   SGAREQFGSRIGFILAAAGSAVGIGNLVGFPVGAAKNGGGAFLLMYAIFVFAICLPVMLA 61

Query: 67  ELTIGRYGQSNPIRAFRSV-WPQGKWGAILLGVIGMVVVSLILSFYAIVAGWLVGSLF-- 123
           E+++GR+ + +P+ A+  +   + KW   + G + +    +I  FY ++  WL G LF  
Sbjct: 62  EMSVGRHAKKDPLGAYSDISGNEKKWK--VAGWLAIATPFMIAVFYMVITVWLFGYLFEA 119

Query: 124 --GSGLTLIGADSASQWLTSFSTERNLILMVSFMVLTMFVVRNGVANGIEKWSTRLMPLL 181
             G+   L   ++   ++ S   E   + M + + +   +++ GV  GIEK +  LMP L
Sbjct: 120 VSGNLDKLANPETFGLFINS---EAIFLYMAAVVGVVYLILQGGVKEGIEKAAKLLMPAL 176

Query: 182 FVLFGLLTVYIFTQEGALDGLKMYLVPDLSHFTPDVVVSAMGQAFFSLSLGVCVMTTYGS 241
           FV+   L +++ T+E A+ G++ Y+VP+ S  T +VV  A+ QAFFSLSLG+ ++ TYGS
Sbjct: 177 FVMLIGLVIFVLTRENAMAGVEFYIVPEFSKITAEVVNGALSQAFFSLSLGMGILITYGS 236

Query: 242 YLNKEANLPKTAAQVALIDTGVAFIAGLMVLPAMFVAKHNGVEIFSSSGELLNSDT-LVF 300
           Y++K A++P  A  VAL DT VAF AGLM+LPA+F    +      +  +L  S   ++F
Sbjct: 237 YIDKRADVPSAAKLVALTDTAVAFTAGLMILPAIFSFNPD-----INPDDLSESSVGMIF 291

Query: 301 TVLPAMF----DTMGAVGA-VIGIIFFLLMIIAALTSSISMLEVPVACAVEELQQKRSSA 355
           T LP++F    D++G +GA ++  +FFLL+  AA+TS +S+ EVPVA  ++E    R  A
Sbjct: 292 TYLPSIFLALQDSIGYMGASIVASLFFLLVFFAAITSLVSIFEVPVAALMDEKGVSRKWA 351

Query: 356 VLWIGGLVTIISGVIVLNF----------------SSLFGLVINFTTVYSQPIIALLITL 399
           +  +G ++ +++ +  L+F                 SLF ++ +       P+  LLI L
Sbjct: 352 LGSLGSIMILLAILSALSFGKVDMLTSFMHYAGADKSLFDVIYDVFYDTILPLNGLLICL 411

Query: 400 IAGWIWNRNQILSELKQGCPDIENSLFWKIWPWYVRLVCPVLMLMVF 446
              + W      + L++G    + S F K     ++   P+++L++F
Sbjct: 412 FVIYRWKSANFNASLEEGSSGYKGSWFEKYVDISLKTFIPLILLVIF 458