Pairwise Alignments

Query, 237 a.a., type IV pilus biogenesis/stability protein PilW from Vibrio cholerae E7946 ATCC 55056

Subject, 943 a.a., hypothetical protein from Pseudomonas sp. S08-1

 Score = 46.2 bits (108), Expect = 2e-09
 Identities = 35/136 (25%), Positives = 59/136 (43%), Gaps = 2/136 (1%)

Query: 36  EARIALGLGYLENGSMIKARENLEKALQHAPDYYRSQLSMAHYYEAVGENDSARKMYRTA 95
           EA   L   YL+ G   +A+    + LQ  PDY    + +   Y+ +G    +      A
Sbjct: 365 EAYCWLAQCYLDLGQSEQAQNFFLQGLQLKPDYDLGWILLGGAYQKIGRQRESEGCLMRA 424

Query: 96  LSEHPKNGNVLNNFGTFLCKQGEYDTADQYFRRAVEQPYYYLISASYENAGLCALKAGKT 155
           ++ +P NG   NN  T      E   A+Q  R A++    +  +A + N G+    A + 
Sbjct: 425 IAINPHNGFAWNNLATTYLDAHELAEAEQVIRVALKLNGEH--AALWNNLGIILSGAQRL 482

Query: 156 DNAREYFKRAIDHDPN 171
             A+E F +  + DP+
Sbjct: 483 QEAKECFAKVQELDPS 498



 Score = 25.8 bits (55), Expect = 0.003
 Identities = 19/89 (21%), Positives = 39/89 (43%), Gaps = 1/89 (1%)

Query: 43  LGYLENGSMIKARENLEKALQHAPDYYRSQLSMAHYYEAVGENDSARKMYRTALSEHPKN 102
           LG+ E G   + R + E  L  +PD   + L +     A  ++ +AR+ +   L   P+ 
Sbjct: 18  LGF-EEGDYTRTRNSCELVLGQSPDDEGTWLLLGDAALASKDSATARRCFEQLLELQPQE 76

Query: 103 GNVLNNFGTFLCKQGEYDTADQYFRRAVE 131
                + G    +   +++A    R+A++
Sbjct: 77  AEYAVSLGKSYIQLQAWESAALALRQALQ 105