Pairwise Alignments

Query, 536 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 491 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  216 bits (551), Expect = 1e-60
 Identities = 138/361 (38%), Positives = 202/361 (55%), Gaps = 3/361 (0%)

Query: 178 HAVYQQFLRMGFATLIVTLVMIGLGVVISRAVIQPLDTIKDVMKKVAQ-GDLTAQIPVLG 236
           H +  +F     A  ++ L+M+    ++ R ++  L+ +KDVM  V + GDL A++P   
Sbjct: 132 HILLDRFTHYAVAVFVLMLLMLCASQLLIRFLLSQLNALKDVMLHVEKSGDLAARVPNRS 191

Query: 237 KDELGIVAQRINNSIAAVHDALVESV-QSASSVAEAAIRIASSAEETSQAVVSQRDQLSQ 295
            DE+G +A+  N ++ A +  +V +V Q+A  + + A  +A+  +E  Q ++ Q+ +  Q
Sbjct: 192 DDEVGQMAKAFN-AMQAGYQRVVNTVSQTAGRLDQGAAHLAAGMKEVRQGMLGQQSETDQ 250

Query: 296 LATAMNQMTATVADVAGHAEDTARDTLDASKEANLGDKDVHSSVDSIRALSVELGVATDQ 355
           +ATA+N+MTATV  +A HA  T   +  A   A  G   V     SI  LS  +    + 
Sbjct: 251 VATAINEMTATVHHIAQHATATRDQSQTADALAGSGKVVVDRVQVSIAGLSSGVQQTAEM 310

Query: 356 VNKLKEGVMQISEVTSVISGISEQTNLLALNAAIEAARAGDQGRGFAVVADEVRNLASRT 415
           + ++ E   +I+ V +VI  I+EQTNLLALNAAIEAARAG+ GRGFAVVADEVRNLA R 
Sbjct: 311 IQRMAEDSQKINGVVNVIHSIAEQTNLLALNAAIEAARAGEMGRGFAVVADEVRNLAKRV 370

Query: 416 HHSTDEIQTMINRLQQLAVSTASAMQKSQALAANSVATAENAGSDLSLIVNHIQHVSDKA 475
             STDEI TM++ LQ         MQ+S   A   +  A  AG  L+ I   +  + +  
Sbjct: 371 QTSTDEITTMVSTLQSGTRDAVDFMQESSHKAEECLQQAREAGDALAAIAGAVAQMRESN 430

Query: 476 TQIATAAEEQSAVAEEMNRNVSGINDAALEMSQAATYLAEESEKLADLSRQLDQKLTAFK 535
           TQIA AA++QS VAEEMNR V  I D            A  S++LA L+ +L+  +   K
Sbjct: 431 TQIAVAAQQQSQVAEEMNRAVVSIRDVTERTVIQTVDSASTSDELATLAGELNAAIGQLK 490

Query: 536 L 536
           L
Sbjct: 491 L 491