Pairwise Alignments

Query, 300 a.a., oligopeptide ABC transporter permease OppC from Vibrio cholerae E7946 ATCC 55056

Subject, 282 a.a., oligopeptide ABC transporter permease from Agrobacterium fabrum C58

 Score =  192 bits (488), Expect = 7e-54
 Identities = 104/274 (37%), Positives = 155/274 (56%), Gaps = 2/274 (0%)

Query: 29  ARIRFMRNKAAMVSLFVLMLITLAVVFLPMFSAYSYEDTDWYAMHAGP--SAEHWFGTDA 86
           +R+    N   ++  F+  +I LAVVF  +      +  D  A  A P  +A H  GTD 
Sbjct: 6   SRLSRFANLEFVLGAFLTTVICLAVVFSDVLFPGGADKIDLMARLAKPFANAAHPLGTDP 65

Query: 87  LGRDLFVRTLVGGRISLMVGIMGALVAVLIGTLYGAASGFIGGRTDRVMMRILEILYAIP 146
           LGRD+  R + GG+ISL+VG    + AV+ G   G  +G+  G  D ++MR  +I  A+P
Sbjct: 66  LGRDVLARVVAGGKISLLVGFTSVIGAVIFGVAVGLVAGYYRGFWDMLVMRFADIQLAMP 125

Query: 147 FMFLVIVLVTFFGRNIVLIFVAIGAIAWLDMARIVRGQTLSLRSKEFIEAAHVCGVSKWN 206
           F+ L I  +   G ++    + +    W+  AR+VRG  L+LR +EFI +A   GV  W 
Sbjct: 126 FILLAITFIAIVGGSLTNTIILLIISQWVQYARLVRGSVLTLREREFILSARAIGVKDWR 185

Query: 207 IITRHIVPNVLGIVAVYSTLLIPSMILTESFLSFLGLGVQEPMTSWGALLQEGANTMEVA 266
           II +H++PN++G V V  TL + + IL ES L+FLGLGV   + SWG +L +G   ++ A
Sbjct: 186 IILQHLLPNLIGPVIVLMTLNVANNILLESSLTFLGLGVDPTIPSWGGMLADGRTYLQTA 245

Query: 267 IWQLLFPAAFMVLTLFCFNYVGDGLRDALDPKDR 300
            W  +FP   ++LT+   N +GD LRD+LDP  R
Sbjct: 246 WWVSVFPGLAILLTVLGLNLLGDWLRDSLDPTGR 279