Pairwise Alignments

Query, 554 a.a., DNA repair protein RecN from Vibrio cholerae E7946 ATCC 55056

Subject, 553 a.a., DNA repair protein RecN from Escherichia coli Nissle 1917

 Score =  598 bits (1542), Expect = e-175
 Identities = 311/553 (56%), Positives = 396/553 (71%)

Query: 1   MLAHLSINNFAIVKSLQLELSKGMTTITGETGAGKSIAIDALGLCLGGRAEASMVRQGED 60
           MLA L+I+NFAIV+ L+++   GMT ITGETGAGKSIAIDALGLCLGGRAEA MVR G  
Sbjct: 1   MLAQLTISNFAIVRELEIDFHSGMTVITGETGAGKSIAIDALGLCLGGRAEADMVRTGAA 60

Query: 61  KTEVSAAFHLDNNLLASRWLEDNELLEGKECILRRIITKDGRSKAFINGSPVPLSQLKTL 120
           + ++ A F L +   A RWLE+N+L +G EC+LRR+I+ DGRS+ FING+ VPLSQL+ L
Sbjct: 61  RADLCARFSLKDTPAALRWLEENQLEDGHECLLRRVISSDGRSRGFINGTAVPLSQLREL 120

Query: 121 GQLLINVHGQHAHQQLMKPEYQLSMLDQYAGHADLLKATRHAYQNWRQASNQLKQLRENS 180
           GQLLI +HGQHAHQ L KPE+Q  +LD YA     L+     YQ W Q+   L   ++ S
Sbjct: 121 GQLLIQIHGQHAHQLLTKPEHQKFLLDGYANETSQLQEMTARYQLWHQSCRDLAHHQQLS 180

Query: 181 QQNQAQLQLLEYQIKELNELALGEDEFVELEQEQKRLANSGDLALNCQRAIELLNEGEEV 240
           Q+  A+ +LL+YQ+KELNE      EF ++++E KRLANSG L    Q A+ L+ +GE+ 
Sbjct: 181 QERAARAELLQYQLKELNEFNPQPGEFEQIDEEYKRLANSGQLLTTSQNALALMADGEDA 240

Query: 241 NALGLLQSVSHTLIDLAEMDSKLTALPSMVAEALIQLEETYHELRNYLDSIDVDPERMAY 300
           N    L +    + +L  MDSKL+ +  M+ EA IQ+ E   ELR+Y D +D+DP R+  
Sbjct: 241 NLQSQLYTAKQLVSELIGMDSKLSGVLDMLEEATIQIAEASDELRHYCDRLDLDPNRLFE 300

Query: 301 VEERYSKVMSLARKHHVLPEELYQHHQALLQQIAQLDCSDEKMSALASEVDVLYQTFVAA 360
           +E+R SK +SLARKHHV PE L Q++Q+LL++  QLD   +    LA  V   +Q  +  
Sbjct: 301 LEQRISKQISLARKHHVSPEALPQYYQSLLEEQQQLDDQADSQETLALAVTKHHQQALET 360

Query: 361 ADKLHKSRVRYAKELDKLISQSMHELSMEKAQFKIEVQQDSAHSSPLGFDAVTFLVSTNP 420
           A  LH+ R  YA EL +LI+ SMH LSM   QF I+V+ D  H    G D + F V+TNP
Sbjct: 361 ARALHQQRQHYANELAQLITDSMHALSMPHGQFTIDVKFDEHHLGADGADRIEFRVTTNP 420

Query: 421 GQPLQPIAKVASGGELSRMSLAIQVITAQKVDTPSLIFDEVDVGISGPTAAVVGKLLRKL 480
           GQP+QPIAKVASGGELSR++LAIQVITA+K++TP+LIFDEVDVGISGPTAAVVGKLLR+L
Sbjct: 421 GQPMQPIAKVASGGELSRIALAIQVITARKMETPALIFDEVDVGISGPTAAVVGKLLRQL 480

Query: 481 GESTQVLCVTHLPQVAGCGHHQLFVAKQTKAGKTETQMLKLDQEQRIAELARLLGGSQIT 540
           GESTQV+CVTHLPQVAGCGH   FV+K+T    TET M  LD++ R+ ELARLLGGS++T
Sbjct: 481 GESTQVMCVTHLPQVAGCGHQHYFVSKETDGAMTETHMQSLDKKARLQELARLLGGSEVT 540

Query: 541 ESTLANAKELLIA 553
            +TLANAKELL A
Sbjct: 541 RNTLANAKELLAA 553