Pairwise Alignments

Query, 979 a.a., DEAD/DEAH box helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 590 a.a., type III restriction enzyme, res subunit (RefSeq) from Shewanella sp. ANA-3

 Score = 73.6 bits (179), Expect = 4e-17
 Identities = 91/366 (24%), Positives = 159/366 (43%), Gaps = 43/366 (11%)

Query: 222 QVEALTALNATRAQGFSRGLVVLATGMGKTWLAAFDALQTQSTKVLFVAHREEILLQAEK 281
           Q +A+ A  A   +     ++VL TG GK+ + A +  +    +VL + H +E++ Q  +
Sbjct: 15  QQQAVDAAIAHFKKSTDSAVLVLPTGAGKSIVIA-ELARIARGRVLVLTHVKELVAQNAQ 73

Query: 282 TFCQLIPNAKTGLYNGVTQNTQAMLLFASVATIGKQNHLQRFAADHFDYIVVDEFHHAAA 341
               L   A         ++T    + ASV +  +   L +F  + F  +++DE H  + 
Sbjct: 74  KVGLLTTEASIYSAGLNQKSTDGKTVVASVQSAARA--LNQFD-EPFSLVIIDECHRVSL 130

Query: 342 RS---YRNLLTYFK---PKF-LLGLTATPER----------------SDQADILSLCDSN 378
                Y+ +L++ +   PK  LLGLTATP R                S +  I   C   
Sbjct: 131 EKTSQYQQILSHLQQRNPKLRLLGLTATPYRLGTGWIYKRHYHGKVGSPELGIFEQCIFE 190

Query: 379 LVFERNLVHGIDEKILVPFDYHGIYDQAVNYQEIPWRNGKFDPDSLDNAL------ATQR 432
           L     +  G    +  P  + G+  Q    Q  P  NG++ P++  NAL      AT  
Sbjct: 191 LPIRPLIKQGY---LTAPTLFDGLSAQYDFSQIKPNDNGEY-PEAQVNALLNHAGRATTA 246

Query: 433 RAEHVYQHWHQKKQTRTLAFCVSKKHADFMAEFCLSKGIKAIAVYSDSKV--RRNQALQW 490
             + + +  H ++    + F  + +HA+ +      +  +  A+ +       R++ ++ 
Sbjct: 247 IVKQLIELSHHRQGI--IIFAATVRHAEEIVSQLNKEHSEQTAIVTAQTPDNERDELIKR 304

Query: 491 LDSGKIDILFSVDLFNEGTDLPAIDTILMLRPTESKILFLQQLGRGLRRSIETQKSKLVV 550
             + ++  L +V +   G D P +D I +LRPT S  LF Q +GRGLR  I   K   +V
Sbjct: 305 FKARELKFLVNVAVLTTGFDAPHVDLIAILRPTASVSLFQQMIGRGLR--ICESKKDCLV 362

Query: 551 IDFIGN 556
           ID+  N
Sbjct: 363 IDYAAN 368