Pairwise Alignments

Query, 525 a.a., lipid II flippase MurJ from Vibrio cholerae E7946 ATCC 55056

Subject, 540 a.a., integral membrane protein MviN from Synechococcus elongatus PCC 7942

 Score =  156 bits (395), Expect = 2e-42
 Identities = 126/446 (28%), Positives = 209/446 (46%), Gaps = 30/446 (6%)

Query: 16  IVSAMTLISRVLGLVRDVVVANLMGAGASADVFFFANRIPNFLRRLFA--EGAFSQAFVP 73
           IV+  TL+S+V GLVR   +A   G G + D + +A  IP FL  L     G F  A V 
Sbjct: 17  IVAVATLLSKVFGLVRQQAIAAAFGVGPAFDAYNYAYVIPGFLLILLGGINGPFHSAMVS 76

Query: 74  VLTEYHASGDINKTRDLIARASGTLGVLVTIVTLIGVLGSGAVTALFGAGWFLDWLNGGP 133
           VL    A  D   +  L+   +  +G+ + IVT++ V+ +  +  L   G  L       
Sbjct: 77  VL----AKRDRQDSGPLVETITTLVGISLLIVTVVIVVFADPLIGLVAPGLELTPTGQET 132

Query: 134 AAGKFELASLLLKITFPYLWFITFVALSGAILNTLGKFAVSSFTPVFLNVMMI----LCA 189
            A    +A L L+I  P       + +   +LN    + + S +P+F +V +I    L  
Sbjct: 133 RA----IAVLQLRIMAPMALLAGLIGIGFGVLNAADTYWLPSISPLFSSVTVIAGVGLLW 188

Query: 190 WYLSPNLEQPEVGLAIGV------FLGGLVQFLFQLPFLIKAGVL-VRPKWGWKDPGVVK 242
           W +   +  P++ +  G+       LG ++Q+L QLP   + G+  +R ++ W+ P V +
Sbjct: 189 WQVGSRITSPQLAIVGGLVLAGSTLLGAILQWLIQLPSQFRHGLAGLRLRFEWQRPEVKE 248

Query: 243 IRTLMIPALFGVSVSQINLLFDSFVASFLQTGSISWLYYSDRLLEFPLGLFGIAIATVIL 302
           +  ++ PA F   + QIN+  D F ASF+   +   L Y+  L++ PLG+    I   +L
Sbjct: 249 VLRILGPATFSSGMLQINVYTDLFFASFIPQAAAG-LGYAGLLVQTPLGILSNVILVPLL 307

Query: 303 PALSRKHVDAHSDGFAHTMDWGIRMVTFLGIPAMLGLMVLAKPMLMVLFMRGEFTPSDVE 362
           P LSR             +  G+ +   L +P    +  LA P++ +++ RG F     +
Sbjct: 308 PVLSRLAEPDQWPELKQRIRQGLFLTALLMLPLGALMAALALPIVQLVYERGAFQTDATD 367

Query: 363 QASYSLLAYSSGLLSFMLIKVLAPGYYSRQDTKTPVRYGIIAMVSNIVLNAIFAWF---- 418
             +  L+AYS G+  ++   VL   +Y+  D +TP R  +I    NI LNA+F W     
Sbjct: 368 LVAALLVAYSIGMFVYLGRDVLVRVFYALGDGQTPFRISMI----NIFLNALFDWLLIGP 423

Query: 419 YGYVGLAVATSMSAFLNMALLYRGLH 444
           +G  GL +AT     +++  L   LH
Sbjct: 424 FGATGLVLATVSVNIISLIALLWILH 449