Pairwise Alignments

Query, 444 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 448 a.a., Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains from Kangiella aquimarina DSM 16071

 Score =  238 bits (607), Expect = 3e-67
 Identities = 138/375 (36%), Positives = 214/375 (57%), Gaps = 11/375 (2%)

Query: 73  LVSSHKQVRWLAFIREAQLSSDTICQFIVNFCIDFFTAPIPDAQLLSTIGHQLGMLKLEK 132
           L S +   +W+A I       D       +   D+   P+     L+T+GH  GM +L+ 
Sbjct: 74  LASLNMATKWIAIIPHENWLEDHPNFLFSHLFYDYHREPLRYDYFLATVGHAFGMAELQN 133

Query: 133 KVWPHFGSAGNMG-LIGESMPMKRLRDQIKRIGPTDVSILIYGESGTGKETVAKAIHKTS 191
           K         +   +IG S     ++  I +I   D ++LI GESGTGKE  A+ IH+ S
Sbjct: 134 KQLNQLQVPQDSDDIIGRSPATALIKRNINKIAMEDATVLITGESGTGKELAARKIHQRS 193

Query: 192 SRAQKPFISVNCRAMSEKRLESELFG-----LGETEEGQQPFLLQADGGTLLLNDILTLP 246
            R Q PFI++NC A+ E    SELFG         +  +   +  ADGGT+ L++I  LP
Sbjct: 194 KRNQGPFIAINCAAIPETLFYSELFGNEKGAFTNADSKKIGRIEAADGGTVFLDEIGDLP 253

Query: 247 KSQQLNLLRFLQEGTVETRQGVRA--VDVRILAANSSDIEKALIDGDFNEELYHYINVLR 304
            + Q+NLLRFL+   +E    V++  VD RI+ A + ++EKA+ DG F E+LYH INVL 
Sbjct: 254 LNLQVNLLRFLELNQIERLGSVKSITVDCRIIVATNVNLEKAVEDGLFREDLYHRINVLT 313

Query: 305 INVPSLKERASDIVLLAKHFLQEYSKEYNAQARSFSDDAVRGLTRYHWPGNVRELMNQIK 364
           +++P+L+ R  DI  LA HFL ++ + +    ++F+   +  + +Y WPGNVRELMN+I+
Sbjct: 314 LHMPALRHRRQDIPELANHFLSQFCEGH--MHKTFTQRCLNAMNQYRWPGNVRELMNRIR 371

Query: 365 RVVLMSDTVVLDESQLDLP-KRSDGRRSLKSIRERSERDALLLVLESHSGQVSTAAKELG 423
           R V++S+  ++ E  +DL         SLK  ++++E++ L+L +E      + AAK LG
Sbjct: 372 RAVILSEGNLITEKHMDLSFSNHQNIVSLKEAKDKAEKETLILSIEKSGYNHTLAAKNLG 431

Query: 424 VSRATMYRLLNKHNL 438
           +SR ++YRLLNKHN+
Sbjct: 432 ISRTSLYRLLNKHNI 446