Pairwise Alignments

Query, 426 a.a., HlyC/CorC family transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 438 a.a., CBS domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  125 bits (313), Expect = 3e-33
 Identities = 92/418 (22%), Positives = 202/418 (48%), Gaps = 25/418 (5%)

Query: 12  LLACLIIISAYFSGSETGMMALNRYRLKHLANSGHKGAKRVEKLLDRPDRLIGLILIGNN 71
           ++ CLI  S +FS SE  + A  + RL+ LA+ G   A++V  L   P     ++ IG N
Sbjct: 9   IILCLIGASCFFSMSEIALAASRKIRLRQLADEGDARAEKVLHLQSYPGSFFTVVQIGLN 68

Query: 72  LVNILASAI-------------ATIIGMRLYGDLGVAIATGALTLVILVFAEVTPKTLAA 118
            V I+   +             ++ +       +   ++   +T   ++ A++ PK +A 
Sbjct: 69  AVAIMGGIVGESAFRPYFYQFLSSWLADPWLSQVSFLMSFLLVTSAFILVADLMPKRIAM 128

Query: 119 LYPERVSYASSVLLTILMKLLSPLVLFVNLMTNGLIRILGISPKHGKGDHLSSEELRTVV 178
             PE+V+ A    +++ + +L PLV F N M +G+ ++L I     + D ++S+++  V+
Sbjct: 129 AMPEQVALAVVGPMSVCIAVLRPLVWFFNGMASGIFKLLQIPT--ARNDEITSDDIYAVM 186

Query: 179 NEA--GGLIPRRHQDMLLSILDLEHVTVNDIMIPRNEITGININDDWKSIVRQLVHSPHG 236
           N     G++ +  Q M+ ++ +++ V+V   M  R  +    + D  + I R++   PH 
Sbjct: 187 NAGAEAGVLDKGEQQMMENVFEMQTVSVTSAMTARESLVYFLLQDSEEDIKRKIAEDPHT 246

Query: 237 RVVLYRDKIDEVVGILRLRE-ASRFMLEKNDFNKEMLLRAADEIYFIPEGTPLNVQLLKF 295
           + ++   ++D V G +  +E   R +  +N   K+  L     I  IP+   L+  +  F
Sbjct: 247 KFLVCDGQLDMVKGFVDAKELLIRVINGENITLKDTSLVHTSLI--IPDTLSLSEAMEYF 304

Query: 296 QRNKERIGLIVDEYGEIIGLTTLEDILEEIVGEFTTSMSPSLADEITPQGDGSFLIEGSA 355
           + ++    ++++EY  ++G+ T  D+   ++G ++   S    ++I  +   S+L++G  
Sbjct: 305 KNSRADFAVVMNEYALVVGIVTTNDLQRAVMGAWSLHES---EEQIIARDSNSWLVDGVT 361

Query: 356 NIRDINKS--LKWKLPTDGPRTLNGLILEHLEEIPASHLSVKVAQHKMEILELEENRI 411
            I D+ ++  ++    +    T+ G ++  L +IP     V    +K E+++++  ++
Sbjct: 362 PITDVMRAFGIEEFPHSQNYETIAGFMMYMLRKIPKRTDFVNYGGYKFEVVDIDSYKV 419