Pairwise Alignments

Query, 326 a.a., transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 408 a.a., ROK family transcriptional regulator from Sinorhizobium meliloti 1021

 Score = 84.7 bits (208), Expect = 4e-21
 Identities = 80/335 (23%), Positives = 145/335 (43%), Gaps = 22/335 (6%)

Query: 4   DVSREHTINNGSSMAD-HDEHPIEQKEFY---MLIGLDIGGTKIEICVLDKQGSMLYRQR 59
           D+  E  +  G S+A      PI     Y   + +G  +    +E  V D + + L   R
Sbjct: 69  DLIEEGLLIEGQSVAGAQGRRPIPVAIDYAGGVALGFKLMAGSVECVVTDLETTPLASLR 128

Query: 60  IATP----DNYSQFVDCVC-SLIVDAEQATQPVDSIGIGLPGAVSPVTGLIKNANCTFLN 114
           +  P    D  ++ +      L+  A +    +  IGI +PG +     +   +N    +
Sbjct: 129 LPLPAHDPDTIAEALAAAAPKLVALANRPAARLAGIGIAMPGVIDNQRAVCIRSNRYGWD 188

Query: 115 GQDLSSDLQYRLGREVKLANDANCFALSEAIDGAGKESMVVFGAILGTGCGGSIVVNRQV 174
              L   +  R+G  V L +D N +A+++ + G G+    +    +G G   S+V++ ++
Sbjct: 189 NVPLGDLVASRIGVPVWLEDDTNAYAIAQQLFGLGRHYKTMGVLAIGVGVACSLVLDGKL 248

Query: 175 LVGPNAICGEWGHNPLPGYHLEQDGAARYCYCGRQNCIERFISGSGFQDSYQALTG--EC 232
             G +   G++GH P    H+E     R C CG++ C+  + S      ++   +G  E 
Sbjct: 249 YRGAHGAAGKFGHFP----HME---GGRPCECGKRGCLMSYFSEPAMLQTWHERSGRPET 301

Query: 233 ITASEIMKRYKQQEPEAIHCYTQLIDHMARSFAGLVNVLDPDIIVLGG-GLSNIDELYRD 291
              +E++      +  A     +  + + R  AGL+NV+DP++IV+GG  ++  D L+  
Sbjct: 302 DGRAEMVAAIAAGDKAAHSVMREAGETLGRHLAGLMNVIDPEVIVVGGEAVAYGDALFGP 361

Query: 292 LPTATARHVFSDSAQVHFAKAVFGDSSGIRGAAWL 326
           L     R  F  +  V      + D S  RGAA L
Sbjct: 362 LRATLERFAFRQAPPVLLD---WEDDSWARGAAAL 393