Pairwise Alignments

Query, 400 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 406 a.a., Bcr/CflA family drug resistance efflux transporter from Burkholderia phytofirmans PsJN

 Score =  161 bits (408), Expect = 3e-44
 Identities = 124/404 (30%), Positives = 195/404 (48%), Gaps = 13/404 (3%)

Query: 1   MKQAMPSQVSKQQMVLLTLLVLFSPLAIDIYLPALPQISQAFHVEHALAQDTITWFLFAM 60
           M     S+   + ++LL  L    P++ID+YLP+LP I+QAF +    AQ T+T F+F  
Sbjct: 1   MSHVARSRPDGRLILLLGALAACGPISIDMYLPSLPTIAQAFAISTGAAQTTLTSFMFGF 60

Query: 61  GVGQLFAGPLADKYGRRTVALGGISIYALSALLAWSAQSIEWMLMARLLQGLGACATSVA 120
            +G L  GPL+D YGRR V LGGI +YAL+++    + SI  ++  R +Q LGA A SV 
Sbjct: 61  SIGMLLYGPLSDTYGRRPVLLGGIVMYALASVACAMSFSIGSLVTFRFVQALGAGAASVL 120

Query: 121 AFATVRDLFGPQRSGKMISYLNGAICFIPALAPILGSWLTQQFGWRANFSFMTGFALLVG 180
           A A  RD  GP  + +++S L       P LAP++G  L    GWR  F  +T F  +  
Sbjct: 121 ARAIARDAHGPTDAARVLSMLAIVTSIGPLLAPLIGGQLLLLGGWRVVFIVLTLFGTVCA 180

Query: 181 LAMALRLQESNP-YMGSRPAVFK-LSRYAAVLKAPTFLFHASLCLLAMAVILAYVTSAPV 238
           +   L++ E+ P    +  A+ K    Y  +L+ P    H     +A A + AY+T+ P 
Sbjct: 181 ITAFLKVPETWPREKRAHSALLKSFGAYGKLLRDPVAWGHMLCGGMAFASMFAYITATPF 240

Query: 239 ILMERLQLSMNEFTFWFGVNAVINIIACMTAPKVMDKLGTRWSLIIGITTLMIAGSL--M 296
           + +E   +S   + F F +N V  +       +++ +LG+   +    T   IA     +
Sbjct: 241 VYIEYFHVSAQHYGFLFALNIVGIMFGNFMNTRLVGRLGSLPIISFAATVSCIASLFVCL 300

Query: 297 LVLRNQASALAFMLPVFLSSIGFAWILGA-AAGKALAPFGDKAGTAAALLGLFQM---SG 352
           + L       + +  +F   +G   +L A      +  +   AG AAA+ G  Q+   + 
Sbjct: 301 VSLTGWGGLWSIVFGLFF-VVGVVGLLSANCTTDLMHRYPQNAGAAAAVFGAVQLALGAL 359

Query: 353 SGLLVGTLQRIMPEPQLLIGLTMWLAAPALLILFSPLGFRWHAS 396
           S L VG  Q   P+    +G T+ +A   L  L   L  RWH +
Sbjct: 360 SSLAVGLWQDGSPKG---MGATVGVAG-LLCYLGRILVVRWHGT 399