Pairwise Alignments

Query, 359 a.a., transcriptional regulator, GntR family from Pseudomonas syringae pv. syringae B728a

Subject, 231 a.a., Transcriptional regulator, GntR family from Variovorax sp. SCN45

 Score = 58.9 bits (141), Expect = 1e-13
 Identities = 65/200 (32%), Positives = 91/200 (45%), Gaps = 18/200 (9%)

Query: 158 LDEQSAAQHYGVSRAVVREALMRLRDRGLVEKEPYSQWLAGPLTAREITEDYELRACLEP 217
           L E S A   GVSR  VR A+ RL D GL+   P   +      A+++ + + +RA LE 
Sbjct: 22  LMEISLANELGVSRTPVRGAMARLADEGLLVYLPNKGFQVRRFNAKDVFDAFSVRATLEG 81

Query: 218 EALRQTAPQ----LSRETLEAMLARVVEAQNAEQCSLEEIERLED---DLHQQCLGGLQN 270
              R    +     + E L AMLA   E   AE  S E   R  D   + H + L    N
Sbjct: 82  MGCRIVGERGLDDAALERLVAMLAEQHEVLRAEGWSDERAIRWHDLNLEFHGKLLKLADN 141

Query: 271 RKIAMLISQA-QSPMII-------NRIFYRLLSIGAD-EAMLAEHRLIIE-LLLHGAFDA 320
           R +   + +A Q P++        NR    LL   A  E  L EHR I+E L    A DA
Sbjct: 142 RWLTEAVRRACQLPIVFDSHLRPHNRDASTLLYHRAQAEQALEEHRQIVESLSRREAADA 201

Query: 321 AALNLKEHLLRARQRMLQRL 340
            AL ++EH++  R  +++ L
Sbjct: 202 EAL-MREHIIANRDLLVRHL 220



 Score = 47.0 bits (110), Expect = 5e-10
 Identities = 67/247 (27%), Positives = 103/247 (41%), Gaps = 38/247 (15%)

Query: 44  IREVLRNAIVSGAAANGLVLLEAPLAELFGTSRVPVRKALNLLHEEGLISRFDGRGYLVN 103
           + + LRN I  G  A G  L+E  LA   G SR PVR A+  L +EGL+     +G+ V 
Sbjct: 3   VADTLRNRIFDGVIAPGSHLMEISLANELGVSRTPVRGAMARLADEGLLVYLPNKGFQVR 62

Query: 104 P-DAQEVEPLRLSLSHKQFGLDSSEELVDTRPLGER-IHDEIGAALSACIAFGHYRLDEQ 161
             +A++V           F + ++ E +  R +GER + D     L A +A  H    E 
Sbjct: 63  RFNAKDV--------FDAFSVRATLEGMGCRIVGERGLDDAALERLVAMLAEQH----EV 110

Query: 162 SAAQHYGVSRAVVREALMRLRDRGLVEKEPYSQWLAGPLTAREITEDYELRACLEPEALR 221
             A+ +   RA +R   + L   G + K   ++WL   +           RAC  P    
Sbjct: 111 LRAEGWSDERA-IRWHDLNLEFHGKLLKLADNRWLTEAVR----------RACQLPIVFD 159

Query: 222 QTAPQLSRETLEAMLARVVEAQNAEQCSLEEIERLEDDLHQQCLGGLQNRKIAMLISQAQ 281
                 +R+    +  R      AEQ +LEE        H+Q +  L  R+ A   +  +
Sbjct: 160 SHLRPHNRDASTLLYHRA----QAEQ-ALEE--------HRQIVESLSRREAADAEALMR 206

Query: 282 SPMIINR 288
             +I NR
Sbjct: 207 EHIIANR 213