Pairwise Alignments

Query, 745 a.a., GAF:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal from Pseudomonas syringae pv. syringae B728a

Subject, 918 a.a., BarA sensory histidine kinase (= VarS = GacS) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  126 bits (316), Expect = 6e-33
 Identities = 88/265 (33%), Positives = 145/265 (54%), Gaps = 26/265 (9%)

Query: 494 AANDLRRSA-------LENDLARQVRREQQAVRARDELVAVVSHDLRNPMTVISMLCGMM 546
           A +DLR +        +E DLA+  +R Q+A R + E +A +SH+LR P+  +    G  
Sbjct: 261 ATSDLRETLEQMEIQNVELDLAK--KRAQEAARIKSEFLANMSHELRTPLNGV---IGFT 315

Query: 547 QKSFSSDGPHTSRRISTAIDTMQQAASRMNVLLEDLLDTSKIEAGRYTITPQPLEVSQIF 606
           + +  ++   T R     ++T++++A+ +  ++ D+LD SK+EAG+  +   P  +    
Sbjct: 316 RLTLKTELNPTQR---DHLNTIERSANNLLAIINDVLDFSKLEAGKLILESIPFPLRNTL 372

Query: 607 EEAYTLLAPLAMDKSIEISFNAEPDL--KVQADPERLFQVLSNLIGNAIKFTPKMGTIGV 664
           +E  TLLA  + DK +E++ N + D+   V  DP RL QV++NL+GNAIKFT + G I +
Sbjct: 373 DEVVTLLAHSSHDKGLELTLNIKNDVPDNVIGDPLRLQQVITNLVGNAIKFT-ESGNIDI 431

Query: 665 ----AAMSN-GTEIVFTVRDSGEGIPPEQLPHIFERYWTVKEG---NPTGTGLGLYISQG 716
                A+SN   +I   +RD+G GIP      +F+ +            GTGLGL I+Q 
Sbjct: 432 LVEKRALSNTKVQIEVQIRDTGIGIPERDQSRLFQAFRQADASISRRHGGTGLGLVITQK 491

Query: 717 IIKAHGGELAAQSQVGEGSEFRFTV 741
           ++   GG+++  SQ   GS F F +
Sbjct: 492 LVNEMGGDISFHSQPNRGSTFWFHI 516