Pairwise Alignments

Query, 204 a.a., Helix-turn-helix, Fis-type from Pseudomonas syringae pv. syringae B728a

Subject, 195 a.a., recombinase family protein from Methanococcus maripaludis JJ

 Score =  124 bits (312), Expect = 9e-34
 Identities = 77/192 (40%), Positives = 115/192 (59%), Gaps = 7/192 (3%)

Query: 1   MLIGYARVSKADGSQSLDLQHDALRAAGVERDNIYDDLASGGRDDRPGLTACLKSLRDGD 60
           M+IGYARVS  D  Q LD Q D L++ G E+  I+ +  SG +  RP     L+ LR  D
Sbjct: 1   MIIGYARVSTKD--QKLDRQIDELKSFGCEK--IFLEKISGTKKIRPEFDKMLEMLRKND 56

Query: 61  VLVVWKLDRLGRSLAHLVNTVKELSDRKIGLRVLTGKGAQIDTTTASGRMVFGIFATLAE 120
           ++VV +L RL RS   L++ +       + ++ L  K A +DT+TA G+++F IFA LAE
Sbjct: 57  LVVVSELTRLSRSTKDLIDIMNRFEQMDVSVKSL--KEAWLDTSTAHGKLLFTIFAGLAE 114

Query: 121 FERDLIRERTMAGLASARARGRKGGRKFALTKAQVRLAQAAMAQRDTSVSDLCKELGIER 180
           FERDLI ER  +GL +AR+RG+ GGR   +   ++ LA      ++ S++++ K  GI +
Sbjct: 115 FERDLISERVKSGLNAARSRGKLGGRP-TVRNEKINLALKMYDSKEYSINEILKATGISK 173

Query: 181 VTLYRYVGPKGE 192
            TLY Y+  + E
Sbjct: 174 STLYNYLEKRRE 185