Pairwise Alignments

Query, 1044 a.a., virulence protein SrfB from Pseudomonas syringae pv. syringae B728a

Subject, 993 a.a., hypothetical protein (NCBI) from Rhodospirillum rubrum S1H

 Score =  535 bits (1377), Expect = e-156
 Identities = 374/1065 (35%), Positives = 527/1065 (49%), Gaps = 106/1065 (9%)

Query: 2    LPELTQFEDTVHLINDSGIQFLDFAVKLDLRNEPAGRFAKMGNTLIARLLQNQETKQYFH 61
            L  L ++   V L   SGIQFLD   +L    E   +++                   F+
Sbjct: 3    LAPLLKYPPVVWLTPRSGIQFLDLGFRLAGDRERVSQWS-------------------FY 43

Query: 62   FGPVGTANQSGERLAQSQAQERLVSEVDDEDLTLGMQSSFKLLDGLWMPAPVFRFLPPER 121
             GP   A +   R  ++ A+ R+  EVD        +   +    +W+P P FR      
Sbjct: 44   DGPDMPAPRIVGRGGEA-ARGRVSYEVD-------WRGVLETFGRVWVPVPFFRREQAGG 95

Query: 122  YDEGPTNWARVRLIELEQPDVDGNTHRLTLAFDTRAMASATGMQYLAPTRDDINAGSSFR 181
            + +GP NWAR ++I L+QPD  GN HRL LAFDT        M YLAPT +D   G+ F 
Sbjct: 96   HADGPINWARAQVIALDQPDDLGNDHRLVLAFDTNLGEHHADMAYLAPTNEDTQRGAQFG 155

Query: 182  LACHARQSRWFLDQKWVQDWLAEIY------REGNRHRPSEDVEEELVEQRHIG------ 229
             A + +   W+  + W+  W  + +       E  R R    ++  ++ +R  G      
Sbjct: 156  FAANEQAVLWYAGRDWIGQWCRKAFTEMILAEERKRSRAEPVIDAAMINERLAGPREDVA 215

Query: 230  HYLNLLSLMAKPIPEQRSSEPARVVVPEIKLAANGADSIDLPIQVDLVLDVGNSRTCGIL 289
             Y+ LL  +            A  + P + L    +     PI VDLVLD+GNSRTCG+L
Sbjct: 216  RYVALLDFIG-----------ALKITPNLGLIDRVSKPRATPIDVDLVLDLGNSRTCGLL 264

Query: 290  IENH-GQSGDGMKHNYILQIRDLVNPERVYSQPFESRVEFAQASFGKENFSVQSGRHDAF 348
            IE H  ++   +     L +RDL  PER+YS PF+SR+EF +A+ G ++ S  SGR DAF
Sbjct: 265  IETHPDETSVDLAQAVRLSLRDLGMPERLYSDPFDSRIEFNKAAIGWDDISFLSGRADAF 324

Query: 349  QWPTIARVGVEAGRLSGRRRGTEGSTGLSSPKRYLWDENAYTHGWRFNNSYVQTDSEPKA 408
             WPT+ARVGVEA RL+  RRG+EG+TG+SSPKRYLWDE     GWRFN   +   + P A
Sbjct: 325  GWPTVARVGVEAQRLAALRRGSEGATGMSSPKRYLWDETQRRDGWRFNTPGL-VGASPFA 383

Query: 409  TAAPFSHKITKLGQAFYKLK-----NEDDRLPAFSPQYSRSSLMTFMLAEVLTQALLQIN 463
                F+  +   G+  + +      N+D R P+    Y+RS LMTF LAE+L QAL  +N
Sbjct: 384  MGVEFTTLVNDAGEPLHSVPEGVPINDDARFPSIRALYARSHLMTFSLAEILLQALCMMN 443

Query: 464  SPAQRTRMGHTQRPRQLSSIILTVPPGMPQVERSLLNDRLLQALALVWKCMGWHEGDLDP 523
            +PA R R G+   PR+L  +ILTVP GMPQ ER +L  R   A  L++ C+G  E   D 
Sbjct: 444  APAHRLRRGNADLPRRLRRVILTVPTGMPQAERQILEQRAQAARDLIYICLGLGEVVSDG 503

Query: 524  SKAKGLNSPVPAPR--VPLPRIKVEWDEATCGQLVYLYTEIRENFAGHAQEFFDTLARPE 581
              A      V A     PLP + ++WDEA+  Q  YLY+++   + G A+  F  L RP 
Sbjct: 504  EDA---TQKVRATEDDHPLPGVIIKWDEASATQAAYLYSQVAIAYGGDAKACFARLRRPG 560

Query: 582  KAN-REHLTLATIDIGGGTTDLVITDYSLERGAEQASGSNVSIIPEQRFRDSFKVAGDDI 640
            + +  E + LAT+DIGGGTTDLVIT Y ++       G+NV++ P+Q   +   +AGDD+
Sbjct: 561  RPSPDEAIRLATLDIGGGTTDLVITGYRVD-----GHGANVTLFPKQILTEGISLAGDDV 615

Query: 641  LLDIIQRFVLPALEQALR-DFGVVSPRSLLSRLCGDE--STSAQEAILRQQLNLQVFVPL 697
            +  II   VL  +  AL       + +S+++R+ G        +E + RQQ    +  PL
Sbjct: 616  VKAIIAEHVLGPIRAALSLRASEEAVKSVMARMFGGNRGDMDVEEQLRRQQFAAHIGYPL 675

Query: 698  GLRLLKDYETYDPELPSPVHDYLFADLLERDAISERIREYVAGGVRRIDGGRDGFELGQV 757
             LR++  YE +D        D L    +  + I   +   V    RR   G   F L  +
Sbjct: 676  ALRMIVAYEGWDRLSGDNRRDPLVLKDVVGEVIDRSLVARVDEDFRR--HGFTDFSLRDL 733

Query: 758  VLRIDLPAIHRAFLKGQINLSKILDALCEVVFQYPCDALLLTGRPSRLPGVQAYIRRKVP 817
               IDL  I R     +  L+ +L    E+V +   D L+L+GRPSR+P V+  +     
Sbjct: 734  RFEIDLKDIDRT---TRSVLTDMLRGFAELVHRNEADVLILSGRPSRMPAVRDILTETCG 790

Query: 818  LPPGRIVPMNGYRTGGWYPFH-RNGQIDDPKSTAAVGAMLCLLSEQRKVSNFYFSVGRLK 876
            LPP RIVP++ +R G WYPF      I DPK+TAAVGAM+C+L E R + NF F    L 
Sbjct: 791  LPPHRIVPLHEFRVGQWYPFRDHEAHIADPKTTAAVGAMICVLGEGR-LRNFNFRADHLV 849

Query: 877  PYSTMRHIGKLDENNLVIDHDMLYRDVIKSDAQGNEFLQLHEPQLDGPQLRVLGKT--RL 934
            P ST R  GKLD NN + D D+ Y D           L   +P  + PQ     +T   L
Sbjct: 850  PRSTARFFGKLDSNNKLADQDVFYSD-----------LDFDDPDYELPQQTFEFRTPMSL 898

Query: 935  GYRQLNAERWVAAPLYLIELTERGTRKLVGKPTKDGKEACLLLRFRVDGADADRGDAEII 994
            G RQ   + W    LY I+       + + K T    E       RV G    RG   +I
Sbjct: 899  GTRQFAVDWWSGTRLYSIDYASPEVAESLNKRTPLKVEL-----QRVQG----RGGKGVI 949

Query: 995  AETLVIDDNIESNTGESFDRKDVKLQLYTMLSAEGGASNYWLDSG 1039
                +    +E   G S     ++L L T+ + +G    YWLD+G
Sbjct: 950  DALKI--RRVEDAEGRSLASNQIRLWLQTIENQDG----YWLDTG 988