Pairwise Alignments

Query, 1035 a.a., Acriflavin resistance protein from Pseudomonas syringae pv. syringae B728a

Subject, 1032 a.a., Multidrug efflux system MdtABC-TolC, inner-membrane proton/drug antiporter MdtB (RND type) from Pseudomonas sp. S08-1

 Score =  903 bits (2334), Expect = 0.0
 Identities = 475/1021 (46%), Positives = 679/1021 (66%), Gaps = 5/1021 (0%)

Query: 1    MNLSAPFIRRPVATVLLSLAIMLLGAVSFRLLPVAPLPNMDFPVIVVSASLAGASPEVMA 60
            MN S  FI RPVAT LL +AI L G +++RLLPV+ LP +D+P I V     GASP+VM 
Sbjct: 1    MNASRLFILRPVATTLLMVAIFLTGLIAYRLLPVSALPEVDYPTIRVLTLYPGASPQVMT 60

Query: 61   STVATPLERSLGSIAGVNTMTSNSSQGTTRIILQFDLDRDINGAAREVQAAINASRNLLP 120
            S+V  PLER  G + G+  M+S SS G + I L+F L+ +++ A +EVQAAINA+ NLLP
Sbjct: 61   SSVTAPLERQFGQMPGLKQMSSTSSGGASVITLRFSLEVNLDVAEQEVQAAINAATNLLP 120

Query: 121  SGMRSMPTYKKVNPSQAPIMVLSMTSTVLEKGQLYDLASTILSQSLSQVSGVGEVQIGGS 180
              + + P Y KVNP+  P++ L++ S  L   Q++DL  T ++Q ++Q+SGVG V + G 
Sbjct: 121  DDLPAPPVYNKVNPADTPVLTLAIRSNTLPLTQVHDLIDTRMAQKIAQISGVGLVSLAGG 180

Query: 181  SLPAVRIELEPQMLSQYGVSLDDVRTAITGANVRRPKGFVEDDQHNWQVQANDQLETAKD 240
              PAVRI+++P+ L+ +G++L DVR  I   NV +PKG  +      Q+ ANDQL++A +
Sbjct: 181  QRPAVRIKVDPEALASHGLNLADVRELIAAQNVNQPKGNFDGPTRVSQLDANDQLKSAAE 240

Query: 241  YSPLIIRYKDGATLRLKDVAKVSDAVEDRYNSGFYNNDRAVLLVVNRQAGANIIETVAQI 300
            Y  LI++Y +GA LRL+DVA V D  E+   + + + +  VLL + RQ GAN+IE V +I
Sbjct: 241  YQDLILKYDNGAALRLRDVASVVDGAENERLAAWADRNETVLLTIQRQPGANVIEVVDRI 300

Query: 301  KAQLPALRAVLPASVSLNIAMDRSPVIKATLHEAEMTLLIAVVLVVMVVFLFLGSFRASL 360
            +  LP + A LPAS+ + +  DR+  I+A + + +  L++A+ LVV+V FLFL    A++
Sbjct: 301  QRLLPQITAALPASLEVQVLTDRTQTIRAAVKDVQFELVLAIALVVLVTFLFLRKVSATI 360

Query: 361  IPTLAVPVSLVGTFAIMHLFGFSLNNLSLMALILATGLVVDDAIVVLENISRHIHNGLDP 420
            IP++AVP+SL+GTF +M+L GFS+NNL+LMAL +ATG VVDDAIV+LENI+RH+  G  P
Sbjct: 361  IPSIAVPLSLIGTFGVMYLAGFSVNNLTLMALTIATGFVVDDAIVMLENIARHLEEGETP 420

Query: 421  MKAAFLGAKEVGFTLLSMNVSLVAVFISILFMGGLVESLFREFSITLSVSIIVSLIVSLT 480
              AA  GA+++GFTL+S+  SL+AV I +LFM  +V  LFREF+ITL+V+I++SL+VSLT
Sbjct: 421  FNAALKGARQIGFTLISLTFSLIAVLIPLLFMADVVGRLFREFAITLAVAILISLVVSLT 480

Query: 481  LTPMLCARWLKPREAHGENAFQRWSERVNDRMVAGYDRSLGWVMRHRRLTLLSLLITVVV 540
            LTPM+CAR LK  +   +  F + +    D ++  Y   L W +RH+ LTLL  + T+ +
Sbjct: 481  LTPMMCARLLKAEKEEEQGRFYKRAGAFIDGLIERYAVGLTWTLRHQSLTLLVAIGTLAL 540

Query: 541  NIALYVVVPKTFLPQQDTGQLMGFVRGDDGLSFSVMQPKMETFRLSILADPAVESVAGFI 600
             + LY+ VPK F P QDTG + G       +SF  M  + +     IL DP V S++ +I
Sbjct: 541  TVLLYLAVPKGFFPVQDTGVIQGISDAPQSISFKAMSERQQRLAGVILQDPDVSSLSSYI 600

Query: 601  GGSGGT---NNAFMIVRLKPIAERKLSAEKVVERLRKNMPHVPGGRLFLAPDQDLQLGGG 657
            G  G     N+  +++ LKP  ER  +A +V+ERLR  +  VPG  L+L P QDL +   
Sbjct: 601  GVDGDNPTLNSGRLLINLKPHRERDATASEVIERLRPELTKVPGIALYLQPVQDLTIEDR 660

Query: 658  REQTSSQYQYIVQSADLGSLRLWYPKIVAALKSIPELTAIDAREGRGAQQVTLVVNRDTA 717
              +T  Q+Q+ ++S D   L  W P++++AL   PEL  I +       QV L ++RD A
Sbjct: 661  VSRT--QFQFSLESPDGKLLEEWTPRLISALSEQPELRDIASDLQNQGLQVFLNIDRDAA 718

Query: 718  KRLGIDMNMVTAVLNNAYSQRQVSTIYDSLNQYKVVMEVNPKYAQDPVTLEQVQVITADG 777
             RLG+ +  +   L +A+ QRQ+STI+   +QY+VV+E        P  L+++ V TA G
Sbjct: 719  SRLGVTVGNIDDALYDAFGQRQISTIFTQASQYRVVLESMGAGEMGPQALQRIHVATASG 778

Query: 778  QRVPLSSIAHYERSLANDRVSHDGQFAAENISFDLAEGASLDKATVAIERAIAAIGLPSD 837
             +VPL+S+A  E   A+  V+H GQF A  +SF+LA G SL +A   IER    IGLP+ 
Sbjct: 779  GQVPLASLARVEERPASLLVNHIGQFPAVTVSFNLAPGVSLGEAVQVIERVEQEIGLPAG 838

Query: 838  IISKMAGTANAFASTQKSQPWMILGALLAVYLVLGILYESYIHPLTILSTLPSAGVGALL 897
            I ++  G + AF ++  S   +IL A++ +Y+VLG+LYESYIHP+TILSTLPSAGVGALL
Sbjct: 839  IQTQFQGASEAFRASLSSTLLLILAAIVTMYIVLGVLYESYIHPITILSTLPSAGVGALL 898

Query: 898  TIYVLGSEFSLISLLGLFLLIGVVKKNAIMMIDLALHLEREQGMTPQESIRSACLQRLRP 957
             + + G++  LI+++G+ LLIG+VKKNAIMMID AL  ER QGM P ++I  A L R RP
Sbjct: 899  ALLLTGNDLGLIAIIGIILLIGIVKKNAIMMIDFALEAERHQGMAPADAIYQAALLRFRP 958

Query: 958  ILMTTMAAILGALPLLLSTAEGAEMRKPLGLTIIGGLIFSQVLTLYTTPVVYLYLDRLRH 1017
            ILMTT+AA+ GA+PL+L++  GAE+R+PLGL ++GGL+ SQVLTL+TTPV+YL  DRL  
Sbjct: 959  ILMTTLAALFGAVPLMLASGSGAELRQPLGLVMVGGLLLSQVLTLFTTPVIYLAFDRLSR 1018

Query: 1018 R 1018
            R
Sbjct: 1019 R 1019