Pairwise Alignments

Query, 1035 a.a., Acriflavin resistance protein from Pseudomonas syringae pv. syringae B728a

Subject, 1025 a.a., multidrug efflux RND transporter permease subunit MdtC from Escherichia coli ECRC100

 Score = 1114 bits (2881), Expect = 0.0
 Identities = 577/1021 (56%), Positives = 759/1021 (74%), Gaps = 12/1021 (1%)

Query: 5    APFIRRPVATVLLSLAIMLLGAVSFRLLPVAPLPNMDFPVIVVSASLAGASPEVMASTVA 64
            A FI RPVAT+LLS+AI L G + FR+LPVAPLP +DFPVI+VSASL GASPE MAS+VA
Sbjct: 5    ALFIYRPVATILLSVAITLCGILGFRMLPVAPLPQVDFPVIMVSASLPGASPETMASSVA 64

Query: 65   TPLERSLGSIAGVNTMTSNSSQGTTRIILQFDLDRDINGAAREVQAAINASRNLLPSGMR 124
            TPLERSLG IAGV+ MTS+SS G+TRIILQFD DRDINGAAR+VQAAINA+++LLPSGM 
Sbjct: 65   TPLERSLGRIAGVSEMTSSSSLGSTRIILQFDFDRDINGAARDVQAAINAAQSLLPSGMP 124

Query: 125  SMPTYKKVNPSQAPIMVLSMTSTVLEKGQLYDLASTILSQSLSQVSGVGEVQIGGSSLPA 184
            S PTY+K NPS APIM+L++TS    +G+LYD AST L+ ++SQ+ GVG+V +GGSSLPA
Sbjct: 125  SRPTYRKANPSDAPIMILTLTSDTYSQGELYDFASTQLAPTISQIDGVGDVDVGGSSLPA 184

Query: 185  VRIELEPQMLSQYGVSLDDVRTAITGANVRRPKGFVEDDQHNWQVQANDQLETAKDYSPL 244
            VR+ L PQ L   GVSLDDVRTAI+ ANVR+P+G +ED  H WQ+Q ND+L+TA +Y PL
Sbjct: 185  VRVGLNPQALFNQGVSLDDVRTAISNANVRKPQGALEDGTHRWQIQTNDELKTAAEYQPL 244

Query: 245  IIRYKDGATLRLKDVAKVSDAVEDRYNSGFYNNDRAVLLVVNRQAGANIIETVAQIKAQL 304
            II Y +G  +RL DVA V+D+V+D  N+G  N   A+LL++ +   ANII+TV  I+A+L
Sbjct: 245  IIHYNNGGAVRLGDVATVTDSVQDVRNAGMTNAKPAILLMIRKLPEANIIQTVDSIRAKL 304

Query: 305  PALRAVLPASVSLNIAMDRSPVIKATLHEAEMTLLIAVVLVVMVVFLFLGSFRASLIPTL 364
            P L+  +PA++ L IA DRSP I+A+L E E TL+I+V LV++VVFLFL S RA++IP +
Sbjct: 305  PELQETIPAAIDLQIAQDRSPTIRASLEEVEQTLIISVALVILVVFLFLRSGRATIIPAV 364

Query: 365  AVPVSLVGTFAIMHLFGFSLNNLSLMALILATGLVVDDAIVVLENISRHIHNGLDPMKAA 424
            AVPVSL+GTFA M+L GFSLNNLSLMAL +ATG VVDDAIVVLENI+RH+  G+ P++AA
Sbjct: 365  AVPVSLIGTFAAMYLCGFSLNNLSLMALTIATGFVVDDAIVVLENIARHLEAGMKPLQAA 424

Query: 425  FLGAKEVGFTLLSMNVSLVAVFISILFMGGLVESLFREFSITLSVSIIVSLIVSLTLTPM 484
              G +EVGFT+LSM++SLVAVF+ +L MGGL   L REF++TLS++I +SL+VSLTLTPM
Sbjct: 425  LQGTREVGFTVLSMSLSLVAVFLPLLLMGGLPGRLLREFAVTLSIAIGISLLVSLTLTPM 484

Query: 485  LCARWL----KPREAHGENAFQRWSERVNDRMVAGYDRSLGWVMRHRRLTLLSLLITVVV 540
            +C  W+    KPRE      F R    +      GY +SL WV+ H RL  + LL T+ +
Sbjct: 485  MCG-WMLKASKPREQKRLRGFGRMLVALQQ----GYGKSLKWVLNHTRLVGMVLLGTIAL 539

Query: 541  NIALYVVVPKTFLPQQDTGQLMGFVRGDDGLSFSVMQPKMETFRLSILADPAVESVAGFI 600
            NI LY+ +PKTF P+QDTG LMG ++ D  +SF  M+ K++ F   I  DPAV++V GF 
Sbjct: 540  NIWLYISIPKTFFPEQDTGVLMGGIQADQSISFQAMRGKLQDFMKIIRDDPAVDNVTGFT 599

Query: 601  GGSGGTNNAFMIVRLKPIAERKLSAEKVVERLRKNMPHVPGGRLFLAPDQDLQLGGGREQ 660
            GGS   N+  M + LKP  ER  +A+++++RLR  +   PG  LFL   QD+++GG   Q
Sbjct: 600  GGS-RVNSGMMFITLKPRDERSETAQQIIDRLRVKLAKEPGANLFLMAVQDIRVGG--RQ 656

Query: 661  TSSQYQYIVQSADLGSLRLWYPKIVAALKSIPELTAIDAREGRGAQQVTLVVNRDTAKRL 720
            +++ YQY + S DL +LR W PKI   L ++PEL  +++ +     ++ LV +RDT  RL
Sbjct: 657  SNASYQYTLLSDDLAALREWEPKIRKKLATLPELADVNSDQQDNGAEMNLVYDRDTMARL 716

Query: 721  GIDMNMVTAVLNNAYSQRQVSTIYDSLNQYKVVMEVNPKYAQDPVTLEQVQVITADGQRV 780
            GID+    ++LNNA+ QRQ+STIY  +NQYKVVMEV+P+Y QD   LE++ VI  +G+ +
Sbjct: 717  GIDVQAANSLLNNAFGQRQISTIYQPMNQYKVVMEVDPRYTQDISALEKMFVINNEGKAI 776

Query: 781  PLSSIAHYERSLANDRVSHDGQFAAENISFDLAEGASLDKATVAIERAIAAIGLPSDIIS 840
            PLS  A ++ + A   V+H G  AA  ISF+L  G SL  A+ AI+RA+  +G+PS +  
Sbjct: 777  PLSYFAKWQPANAPLSVNHQGLSAASTISFNLPTGKSLSDASAAIDRAMTQLGVPSTVRG 836

Query: 841  KMAGTANAFASTQKSQPWMILGALLAVYLVLGILYESYIHPLTILSTLPSAGVGALLTIY 900
              AGTA  F  T  SQ  +I+ A+  VY+VLGILYESY+HPLTILSTLPSAGVGALL + 
Sbjct: 837  SFAGTAQVFQETMNSQVILIIAAIATVYIVLGILYESYVHPLTILSTLPSAGVGALLALE 896

Query: 901  VLGSEFSLISLLGLFLLIGVVKKNAIMMIDLALHLEREQGMTPQESIRSACLQRLRPILM 960
            +  + FSLI+L+G+ LLIG+VKKNAIMM+D AL  +R   +TPQE+I  ACL R RPI+M
Sbjct: 897  LFNAPFSLIALIGIMLLIGIVKKNAIMMVDFALEAQRHGNLTPQEAIFQACLLRFRPIMM 956

Query: 961  TTMAAILGALPLLLSTAEGAEMRKPLGLTIIGGLIFSQVLTLYTTPVVYLYLDRLRHRYN 1020
            TT+AA+ GALPL+LS  +G+E+R+PLG+TI+GGL+ SQ+LTLYTTPVVYL+ DRLR R++
Sbjct: 957  TTLAALFGALPLVLSGGDGSELRQPLGITIVGGLVMSQLLTLYTTPVVYLFFDRLRLRFS 1016

Query: 1021 K 1021
            +
Sbjct: 1017 R 1017