Pairwise Alignments

Query, 409 a.a., Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region from Pseudomonas syringae pv. syringae B728a

Subject, 381 a.a., acyl-CoA dehydrogenase, short-chain specific from Caulobacter crescentus NA1000 Δfur

 Score =  163 bits (413), Expect = 7e-45
 Identities = 128/389 (32%), Positives = 195/389 (50%), Gaps = 19/389 (4%)

Query: 9   VQALRERVTAFMDAYVYPAEPVFERQVAEGDRWQPTAIMEELKARARSEGLWNLFLPDSG 68
           + AL + +  F+   + P E +    V+E D   P +I+EE+K      GL+ L +P+S 
Sbjct: 7   LSALIDVIQRFVAERLRPIEGL----VSETDE-VPGSIIEEMKQL----GLFGLSIPESY 57

Query: 69  LGAGLSNLEYAPLAEIMGRSMLGPEPFNCSAPDTG-NMEVLVRYASEEQKARWLEPLLRG 127
            G GLS  E A +  I+      P   +    + G   + LV +  E QKARWL  +  G
Sbjct: 58  GGLGLSLEEEARV--IVAFCHTAPAFRSTFGTNVGIGSQGLVMFGDEAQKARWLPSIASG 115

Query: 128 EIRSAFAMTEPDVASSDATNMAARAERDGDQWVINGRKWWTSGACDPRCKILIFMGLSNP 187
           E  +AFA+TE + A SD+ ++  RA RDGD +V+NG K + + A   R  +   M  ++P
Sbjct: 116 ETITAFALTEAE-AGSDSASVQTRAVRDGDHYVLNGVKRYITNA--GRANLFTVMARTDP 172

Query: 188 EGPRHQQHSMILVPVDTPGVKIVRPLPVFGYDDAPHGHAEVLFENVRVPFENVLLGEGRG 247
                   S  LVP D PG+ + +P    G   A H H +V+FE+VRVP EN L  EG G
Sbjct: 173 NTKGGAGVSAFLVPADLPGLSVGKPEKKMGQQGA-HIH-DVVFEDVRVPVENRLGAEGEG 230

Query: 248 FEIAQGRLGPGRIHHCMRSIGMAERALELMCRRSIDRVAFGKPLARLGGNIDLIADSRME 307
           F +A   L  GR+H     +G+AER +      + +R  FG+P+A       +IADS+ E
Sbjct: 231 FTVAMRVLDRGRVHISAVCVGVAERLIADCVAYASERKQFGQPIASFQLIQAMIADSKTE 290

Query: 308 IDMARLLTLKAAYMMDTVGNKVARSEIAQIKVVAPNVALKVIDRAIQMHGAAGISSDFPL 367
              A+ L    A   D   N     E A  K+ A  +  +V DRA+Q+ G AG  +D+ +
Sbjct: 291 ALAAKALVFDTARKRDAGAN--VTLEAAATKLFASEMVGRVADRAVQVFGGAGYVADYGI 348

Query: 368 AYMYAMQRTLRLADGPDEVHRAAVGKYEL 396
             +Y   R  R+ +G  ++ +  + +  L
Sbjct: 349 ERLYRDVRIFRIYEGASQIQQLIIARETL 377