Pairwise Alignments

Query, 277 a.a., ABC transporter from Pseudomonas syringae pv. syringae B728a

Subject, 505 a.a., amino acid ABC transporter permease/ATP-binding protein from Pseudomonas fluorescens SBW25

 Score =  142 bits (358), Expect = 1e-38
 Identities = 86/234 (36%), Positives = 141/234 (60%), Gaps = 17/234 (7%)

Query: 4   AIHVQGLNKTFSHKSALIDLALSIQPGEMVALIGASGSGKSTLLRHLAGLACCDRSNGGQ 63
           A+    L+K ++    L  + L IQPGE+V++IG SGSGK+TL+R L GL   ++ + G+
Sbjct: 256 ALQAARLHKAYNDIEVLGSVNLQIQPGEVVSVIGPSGSGKTTLIRLLNGL---EQLDNGE 312

Query: 64  VQVLGREVQSSGRLNSQVRRL------RADIGYIFQQFNLVNRLSVLDNVLLGCLGRMPR 117
           +++ G+      ++ +Q  +       R +IG +FQ FNL   LSVLDN+L+      P+
Sbjct: 313 IRINGQPFIHLNKVGAQKPQYIEHAEHRLNIGMVFQSFNLFPHLSVLDNLLMA-----PK 367

Query: 118 WRGSLALFNNEEKQRAMVALERVGLADLAAQRASTLSGGQQQRVAIARALTQRAEVILAD 177
           +    A   ++ KQ+A   L +VG+ D A +    LSGGQQQRVAIARAL  R +++L D
Sbjct: 368 YHRLGA--TSDLKQQAYALLHKVGMLDHAWKYPHQLSGGQQQRVAIARALMMRPQIMLFD 425

Query: 178 EPIASLDPESARRVMEILADINRRDGKTVVVTLHQVDYAVRYCPRAVALKSGRI 231
           EP ++LDPE    V++++  +   +G T+V+  H++++A +   R V ++ GR+
Sbjct: 426 EPTSALDPEKVNEVLQVIEAL-AEEGITMVIVTHEMNFAFKVSDRIVFMEKGRV 478